Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 XBP1P1-201ENST00000436573 652 ntBASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 AC140113.1-201ENST00000603467 169 ntBASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 DUTP3-201ENST00000450025 415 ntBASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 RN7SL494P-201ENST00000461517 304 ntBASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 AC068867.1-201ENST00000559855 150 ntBASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 FRMPD2B-201ENST00000431305 1347 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 PGAM1P12-201ENST00000505622 748 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AC093752.3-201ENST00000567343 901 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 HNRNPA1P42-201ENST00000458678 957 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AREG-202ENST00000502307 956 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 PTPN20CP-201ENST00000614090 920 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AC090510.3-201ENST00000615831 821 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AC139712.1-201ENST00000378256 1875 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 CHCHD2P2-201ENST00000503744 321 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 BX088702.1-201ENST00000610784 235 ntBASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13BQ7Z7G8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 SERBP1P2-201ENST00000436888 1164 ntBASIC9.03□□□□□ -0.96
VPS13BQ7Z7G8 AC063952.3-201ENST00000467756 308 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms