Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 SAMD11P1-201ENST00000571429 661 ntBASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AC000095.1-201ENST00000603208 874 ntBASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 AC073592.8-201ENST00000624126 511 ntBASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 TUBB3P1-201ENST00000405796 1332 ntBASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMARCD3Q6STE5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 LILRP1-201ENST00000444199 1370 ntBASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AC109322.1-201ENST00000524499 1264 ntBASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AC092865.5-201ENST00000545435 363 ntBASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AC113367.3-201ENST00000508316 1912 ntBASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AC006504.5-208ENST00000588784 2401 ntBASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.85□□□□□ -0.19
SMARCD3Q6STE5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms