Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTPN20Q4JDL3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 AC003102.2-201ENST00000589195 1469 ntBASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 AC245100.3-201ENST00000441281 285 ntBASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 AC012645.4-201ENST00000610691 1061 ntBASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 CLUHP2-201ENST00000426660 1303 ntBASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 FAM45BP-202ENST00000592932 1624 ntBASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN20Q4JDL3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 AC025279.2-201ENST00000569730 653 ntBASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 BTNL10-201ENST00000595971 695 ntBASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN20Q4JDL3 ENPP7P14-201ENST00000621765 1040 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms