Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.23□□□□□ -0.13
TRA2BP62995 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRA2BP62995 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRA2BP62995 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.23□□□□□ -0.13
TRA2BP62995 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRA2BP62995 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRA2BP62995 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRA2BP62995 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRA2BP62995 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRA2BP62995 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.22□□□□□ -0.13
TRA2BP62995 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 SALL4P5-201ENST00000419001 1760 ntBASIC14.22□□□□□ -0.13
TRA2BP62995 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.22□□□□□ -0.13
TRA2BP62995 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRA2BP62995 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.22□□□□□ -0.13
TRA2BP62995 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRA2BP62995 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.22□□□□□ -0.13
TRA2BP62995 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 AC245100.3-201ENST00000441281 285 ntBASIC14.22□□□□□ -0.13
TRA2BP62995 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.22□□□□□ -0.13
TRA2BP62995 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.22□□□□□ -0.13
TRA2BP62995 AC068587.3-201ENST00000526613 355 ntBASIC14.22□□□□□ -0.13
TRA2BP62995 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.22□□□□□ -0.13
TRA2BP62995 MIR5189-201ENST00000577370 114 ntBASIC14.22□□□□□ -0.13
TRA2BP62995 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.22□□□□□ -0.13
TRA2BP62995 OR2I1P-210ENST00000642037 4691 ntBASIC14.22□□□□□ -0.13
TRA2BP62995 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRA2BP62995 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.22□□□□□ -0.13
TRA2BP62995 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.22□□□□□ -0.13
TRA2BP62995 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRA2BP62995 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRA2BP62995 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.22□□□□□ -0.13
TRA2BP62995 AL354702.1-201ENST00000442006 1960 ntBASIC14.22□□□□□ -0.13
TRA2BP62995 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRA2BP62995 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.21□□□□□ -0.13
TRA2BP62995 AL138725.1-201ENST00000407347 1314 ntBASIC14.21□□□□□ -0.13
TRA2BP62995 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
TRA2BP62995 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.21□□□□□ -0.13
TRA2BP62995 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.21□□□□□ -0.13
TRA2BP62995 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.21□□□□□ -0.13
TRA2BP62995 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 FO681548.1-201ENST00000455617 1132 ntBASIC14.21□□□□□ -0.13
TRA2BP62995 MESTP3-201ENST00000503460 968 ntBASIC14.21□□□□□ -0.13
TRA2BP62995 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.21□□□□□ -0.13
TRA2BP62995 TDH-203ENST00000531764 1110 ntBASIC14.21□□□□□ -0.13
TRA2BP62995 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.21□□□□□ -0.13
TRA2BP62995 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.21□□□□□ -0.13
TRA2BP62995 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.21□□□□□ -0.13
TRA2BP62995 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.21□□□□□ -0.13
TRA2BP62995 AC138761.1-201ENST00000584393 385 ntBASIC14.21□□□□□ -0.13
TRA2BP62995 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.21□□□□□ -0.13
TRA2BP62995 AC010319.3-201ENST00000597028 470 ntBASIC14.21□□□□□ -0.13
TRA2BP62995 AC145423.3-201ENST00000615987 467 ntBASIC14.21□□□□□ -0.13
TRA2BP62995 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRA2BP62995 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 AC015802.1-201ENST00000588104 1449 ntBASIC14.21□□□□□ -0.13
TRA2BP62995 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRA2BP62995 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRA2BP62995 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms