Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.25□□□□□ -0.13
SMSP52788 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 BTNL10-201ENST00000595971 695 ntBASIC14.25□□□□□ -0.13
SMSP52788 AC008735.3-201ENST00000596646 500 ntBASIC14.25□□□□□ -0.13
SMSP52788 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMSP52788 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMSP52788 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 AC098850.1-201ENST00000419919 790 ntBASIC14.24□□□□□ -0.13
SMSP52788 TMEM14DP-201ENST00000422205 345 ntBASIC14.24□□□□□ -0.13
SMSP52788 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.24□□□□□ -0.13
SMSP52788 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SMSP52788 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.24□□□□□ -0.13
SMSP52788 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.24□□□□□ -0.13
SMSP52788 HNRNPUP1-201ENST00000554987 333 ntBASIC14.24□□□□□ -0.13
SMSP52788 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.24□□□□□ -0.13
SMSP52788 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.24□□□□□ -0.13
SMSP52788 MIR4525-201ENST00000580000 75 ntBASIC14.24□□□□□ -0.13
SMSP52788 AC097359.3-201ENST00000603982 1210 ntBASIC14.24□□□□□ -0.13
SMSP52788 AL033527.4-201ENST00000641026 673 ntBASIC14.24□□□□□ -0.13
SMSP52788 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SMSP52788 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SMSP52788 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMSP52788 AL359258.3-201ENST00000622910 2331 ntBASIC14.24□□□□□ -0.13
SMSP52788 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.24□□□□□ -0.13
SMSP52788 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SMSP52788 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMSP52788 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMSP52788 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SMSP52788 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.23□□□□□ -0.13
SMSP52788 AC005912.2-201ENST00000619492 2400 ntBASIC14.23□□□□□ -0.13
SMSP52788 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.23□□□□□ -0.13
SMSP52788 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMSP52788 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SMSP52788 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMSP52788 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMSP52788 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMSP52788 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SMSP52788 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SMSP52788 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMSP52788 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMSP52788 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SMSP52788 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMSP52788 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.23□□□□□ -0.13
SMSP52788 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SMSP52788 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.23□□□□□ -0.13
SMSP52788 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.23□□□□□ -0.13
SMSP52788 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms