Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
CDC34P49427 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.02□□□□□ -0.49
CDC34P49427 AC025580.3-201ENST00000617932 1424 ntBASIC12.02□□□□□ -0.49
CDC34P49427 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.02□□□□□ -0.49
CDC34P49427 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CDC34P49427 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
CDC34P49427 HLA-H-201ENST00000383620 1096 ntBASIC12.01□□□□□ -0.49
CDC34P49427 AC002056.1-201ENST00000395613 760 ntBASIC12.01□□□□□ -0.49
CDC34P49427 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CDC34P49427 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 KRT18P67-201ENST00000432816 1264 ntBASIC12.01□□□□□ -0.49
CDC34P49427 HCG4P8-203ENST00000443049 980 ntBASIC12.01□□□□□ -0.49
CDC34P49427 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.01□□□□□ -0.49
CDC34P49427 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.01□□□□□ -0.49
CDC34P49427 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CDC34P49427 RARRES2P8-201ENST00000566335 367 ntBASIC12.01□□□□□ -0.49
CDC34P49427 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.01□□□□□ -0.49
CDC34P49427 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.01□□□□□ -0.49
CDC34P49427 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CDC34P49427 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC34P49427 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.01□□□□□ -0.49
CDC34P49427 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CDC34P49427 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CDC34P49427 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC34P49427 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12□□□□□ -0.49
CDC34P49427 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12□□□□□ -0.49
CDC34P49427 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms