Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
NKX2-1P43699 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 FO393414.2-201ENST00000405153 598 ntBASIC12.44□□□□□ -0.42
NKX2-1P43699 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.44□□□□□ -0.42
NKX2-1P43699 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.44□□□□□ -0.42
NKX2-1P43699 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.44□□□□□ -0.42
NKX2-1P43699 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.44□□□□□ -0.42
NKX2-1P43699 AC145285.3-201ENST00000564603 959 ntBASIC12.44□□□□□ -0.42
NKX2-1P43699 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.44□□□□□ -0.42
NKX2-1P43699 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.44□□□□□ -0.42
NKX2-1P43699 AC015910.1-201ENST00000579400 975 ntBASIC12.44□□□□□ -0.42
NKX2-1P43699 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 AC064836.3-201ENST00000607928 673 ntBASIC12.44□□□□□ -0.42
NKX2-1P43699 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.44□□□□□ -0.42
NKX2-1P43699 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
NKX2-1P43699 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.43□□□□□ -0.42
NKX2-1P43699 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX2-1P43699 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.43□□□□□ -0.42
NKX2-1P43699 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NKX2-1P43699 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX2-1P43699 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NKX2-1P43699 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.43□□□□□ -0.42
NKX2-1P43699 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.43□□□□□ -0.42
NKX2-1P43699 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
NKX2-1P43699 AC104457.1-201ENST00000401024 814 ntBASIC12.43□□□□□ -0.42
NKX2-1P43699 AL671277.1-201ENST00000429656 993 ntBASIC12.43□□□□□ -0.42
NKX2-1P43699 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 RN7SL589P-201ENST00000481268 310 ntBASIC12.43□□□□□ -0.42
NKX2-1P43699 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX2-1P43699 AC022447.6-201ENST00000515522 438 ntBASIC12.43□□□□□ -0.42
NKX2-1P43699 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX2-1P43699 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
NKX2-1P43699 AP000842.3-202ENST00000569238 1080 ntBASIC12.43□□□□□ -0.42
NKX2-1P43699 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.43□□□□□ -0.42
NKX2-1P43699 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.43□□□□□ -0.42
NKX2-1P43699 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.43□□□□□ -0.42
NKX2-1P43699 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
NKX2-1P43699 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NKX2-1P43699 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.43□□□□□ -0.42
NKX2-1P43699 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NKX2-1P43699 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms