Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.68□□□□□ -0.06
HOXA6P31267 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.68□□□□□ -0.06
HOXA6P31267 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.68□□□□□ -0.06
HOXA6P31267 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.68□□□□□ -0.06
HOXA6P31267 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 C2orf69P1-201ENST00000563532 1093 ntBASIC14.68□□□□□ -0.06
HOXA6P31267 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.68□□□□□ -0.06
HOXA6P31267 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.68□□□□□ -0.06
HOXA6P31267 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.68□□□□□ -0.06
HOXA6P31267 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HOXA6P31267 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.68□□□□□ -0.06
HOXA6P31267 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HOXA6P31267 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.68□□□□□ -0.06
HOXA6P31267 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.68□□□□□ -0.06
HOXA6P31267 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXA6P31267 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HOXA6P31267 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 AC068418.2-201ENST00000577309 3703 ntBASIC14.67□□□□□ -0.06
HOXA6P31267 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 AC009090.5-201ENST00000624886 2285 ntBASIC14.67□□□□□ -0.06
HOXA6P31267 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.67□□□□□ -0.06
HOXA6P31267 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
HOXA6P31267 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 MARK2P16-201ENST00000605714 1723 ntBASIC14.67□□□□□ -0.06
HOXA6P31267 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HOXA6P31267 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HOXA6P31267 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.67□□□□□ -0.06
HOXA6P31267 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 PSMD4P1-201ENST00000433951 1109 ntBASIC14.67□□□□□ -0.06
HOXA6P31267 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.67□□□□□ -0.06
HOXA6P31267 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.67□□□□□ -0.06
HOXA6P31267 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.67□□□□□ -0.06
HOXA6P31267 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.67□□□□□ -0.06
HOXA6P31267 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.67□□□□□ -0.06
HOXA6P31267 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
HOXA6P31267 AC107464.3-201ENST00000609172 737 ntBASIC14.67□□□□□ -0.06
HOXA6P31267 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HOXA6P31267 AC073911.3-201ENST00000624401 631 ntBASIC14.67□□□□□ -0.06
HOXA6P31267 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HOXA6P31267 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HOXA6P31267 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.67□□□□□ -0.06
HOXA6P31267 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HOXA6P31267 AC024909.3-201ENST00000611513 2257 ntBASIC14.67□□□□□ -0.06
HOXA6P31267 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXA6P31267 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 TMBIM7P-202ENST00000641474 1516 ntBASIC14.66□□□□□ -0.06
HOXA6P31267 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXA6P31267 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXA6P31267 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXA6P31267 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms