Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.61■□□□□ 0.25
CTGFP29279 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.61■□□□□ 0.25
CTGFP29279 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTGFP29279 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTGFP29279 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.6■□□□□ 0.25
CTGFP29279 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.6■□□□□ 0.25
CTGFP29279 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.6■□□□□ 0.25
CTGFP29279 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.6■□□□□ 0.25
CTGFP29279 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.6■□□□□ 0.25
CTGFP29279 AC073869.2-201ENST00000417338 1026 ntBASIC16.6■□□□□ 0.25
CTGFP29279 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.6■□□□□ 0.25
CTGFP29279 RPL35P9-201ENST00000446059 350 ntBASIC16.6■□□□□ 0.25
CTGFP29279 RPL18AP8-201ENST00000486071 528 ntBASIC16.6■□□□□ 0.25
CTGFP29279 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.6■□□□□ 0.25
CTGFP29279 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTGFP29279 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CTGFP29279 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.6■□□□□ 0.25
CTGFP29279 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.6■□□□□ 0.25
CTGFP29279 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CTGFP29279 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CTGFP29279 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.6■□□□□ 0.25
CTGFP29279 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.6■□□□□ 0.25
CTGFP29279 AC025183.3-201ENST00000623526 1482 ntBASIC16.6■□□□□ 0.25
CTGFP29279 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTGFP29279 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 AC021305.1-201ENST00000520656 1514 ntBASIC16.6■□□□□ 0.25
CTGFP29279 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTGFP29279 AL590440.2-201ENST00000641973 1595 ntBASIC16.6■□□□□ 0.25
CTGFP29279 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.6■□□□□ 0.25
CTGFP29279 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CTGFP29279 AC108734.2-201ENST00000420887 1069 ntBASIC16.59■□□□□ 0.25
CTGFP29279 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 ERP29P1-201ENST00000442902 706 ntBASIC16.59■□□□□ 0.25
CTGFP29279 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 AL135901.1-201ENST00000451812 333 ntBASIC16.59■□□□□ 0.25
CTGFP29279 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.59■□□□□ 0.25
CTGFP29279 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.59■□□□□ 0.25
CTGFP29279 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.59■□□□□ 0.25
CTGFP29279 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTGFP29279 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTGFP29279 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.58■□□□□ 0.25
CTGFP29279 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.58■□□□□ 0.25
CTGFP29279 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CTGFP29279 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTGFP29279 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CTGFP29279 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.58■□□□□ 0.25
CTGFP29279 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.58■□□□□ 0.25
CTGFP29279 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms