Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ACKR3P25106 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.19□□□□□ -0.3
ACKR3P25106 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.19□□□□□ -0.3
ACKR3P25106 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.19□□□□□ -0.3
ACKR3P25106 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.19□□□□□ -0.3
ACKR3P25106 AC004066.1-201ENST00000502488 802 ntBASIC13.19□□□□□ -0.3
ACKR3P25106 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 TPRX2P-201ENST00000535362 881 ntBASIC13.19□□□□□ -0.3
ACKR3P25106 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ACKR3P25106 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.19□□□□□ -0.3
ACKR3P25106 AL662799.1-202ENST00000614205 422 ntBASIC13.19□□□□□ -0.3
ACKR3P25106 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ACKR3P25106 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 CICP20-201ENST00000443330 2801 ntBASIC13.19□□□□□ -0.3
ACKR3P25106 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 AC007787.1-201ENST00000588095 1583 ntBASIC13.19□□□□□ -0.3
ACKR3P25106 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ACKR3P25106 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
ACKR3P25106 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 LILRP1-201ENST00000444199 1370 ntBASIC13.19□□□□□ -0.3
ACKR3P25106 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.19□□□□□ -0.3
ACKR3P25106 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACKR3P25106 MTHFR-210ENST00000641407 2387 ntBASIC13.18□□□□□ -0.3
ACKR3P25106 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.18□□□□□ -0.3
ACKR3P25106 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ACKR3P25106 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 AL360270.3-201ENST00000609118 1348 ntBASIC13.18□□□□□ -0.3
ACKR3P25106 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ACKR3P25106 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ACKR3P25106 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ACKR3P25106 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.18□□□□□ -0.3
ACKR3P25106 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ACKR3P25106 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ACKR3P25106 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.18□□□□□ -0.3
ACKR3P25106 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
ACKR3P25106 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 SPDYE19P-201ENST00000338590 713 ntBASIC13.18□□□□□ -0.3
ACKR3P25106 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ACKR3P25106 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.18□□□□□ -0.3
ACKR3P25106 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.18□□□□□ -0.3
ACKR3P25106 GNAQP1-201ENST00000444815 1067 ntBASIC13.18□□□□□ -0.3
ACKR3P25106 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.18□□□□□ -0.3
ACKR3P25106 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.18□□□□□ -0.3
ACKR3P25106 RN7SL399P-201ENST00000471648 279 ntBASIC13.18□□□□□ -0.3
ACKR3P25106 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.18□□□□□ -0.3
ACKR3P25106 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.18□□□□□ -0.3
ACKR3P25106 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.18□□□□□ -0.3
ACKR3P25106 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.18□□□□□ -0.3
ACKR3P25106 AL049840.4-201ENST00000602422 811 ntBASIC13.18□□□□□ -0.3
ACKR3P25106 AC107373.2-201ENST00000607735 490 ntBASIC13.18□□□□□ -0.3
ACKR3P25106 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.18□□□□□ -0.3
ACKR3P25106 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ACKR3P25106 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACKR3P25106 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ACKR3P25106 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms