Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 AC018442.1-201ENST00000421439 2061 ntBASIC13.58□□□□□ -0.24
HLA-DOBP13765 AC232323.1-201ENST00000540724 2099 ntBASIC13.58□□□□□ -0.24
HLA-DOBP13765 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 AC023908.3-201ENST00000564211 3047 ntBASIC13.58□□□□□ -0.24
HLA-DOBP13765 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HLA-DOBP13765 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HLA-DOBP13765 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 AC023090.2-201ENST00000625182 2110 ntBASIC13.57□□□□□ -0.24
HLA-DOBP13765 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 NUS1P3-201ENST00000423502 862 ntBASIC13.57□□□□□ -0.24
HLA-DOBP13765 CRB3P1-201ENST00000449338 276 ntBASIC13.57□□□□□ -0.24
HLA-DOBP13765 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 CLUHP6-201ENST00000580789 941 ntBASIC13.57□□□□□ -0.24
HLA-DOBP13765 CU634019.7-201ENST00000624153 1185 ntBASIC13.57□□□□□ -0.24
HLA-DOBP13765 FP236241.2-201ENST00000624906 1185 ntBASIC13.57□□□□□ -0.24
HLA-DOBP13765 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HLA-DOBP13765 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HLA-DOBP13765 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 AC140479.7-201ENST00000636301 2332 ntBASIC13.56□□□□□ -0.24
HLA-DOBP13765 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 KLF2P2-201ENST00000416807 1039 ntBASIC13.56□□□□□ -0.24
HLA-DOBP13765 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DOBP13765 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DOBP13765 AC138761.1-201ENST00000584393 385 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms