Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.39□□□□□ -0.43
DEFA4P12838 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
DEFA4P12838 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
DEFA4P12838 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
DEFA4P12838 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
DEFA4P12838 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
DEFA4P12838 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.38□□□□□ -0.43
DEFA4P12838 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
DEFA4P12838 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
DEFA4P12838 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.38□□□□□ -0.43
DEFA4P12838 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.38□□□□□ -0.43
DEFA4P12838 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.38□□□□□ -0.43
DEFA4P12838 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.38□□□□□ -0.43
DEFA4P12838 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
DEFA4P12838 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.38□□□□□ -0.43
DEFA4P12838 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 AC027601.5-201ENST00000624065 2482 ntBASIC12.38□□□□□ -0.43
DEFA4P12838 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
DEFA4P12838 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.38□□□□□ -0.43
DEFA4P12838 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.38□□□□□ -0.43
DEFA4P12838 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.38□□□□□ -0.43
DEFA4P12838 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
DEFA4P12838 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
DEFA4P12838 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
DEFA4P12838 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
DEFA4P12838 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
DEFA4P12838 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 TUBB3P1-201ENST00000405796 1332 ntBASIC12.37□□□□□ -0.43
DEFA4P12838 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 REXO1L1P-201ENST00000379010 6598 ntBASIC12.37□□□□□ -0.43
DEFA4P12838 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
DEFA4P12838 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
DEFA4P12838 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
DEFA4P12838 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms