Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC9.34□□□□□ -0.91
PKHD1P08F94 WASH3P-207ENST00000560956 1394 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC9.34□□□□□ -0.91
PKHD1P08F94 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.34□□□□□ -0.91
PKHD1P08F94 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC9.34□□□□□ -0.91
PKHD1P08F94 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC9.34□□□□□ -0.91
PKHD1P08F94 GUSBP10-201ENST00000417412 665 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 ALG1L3P-201ENST00000503331 765 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 IGHEP2-201ENST00000519308 1256 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC9.34□□□□□ -0.91
PKHD1P08F94 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC9.34□□□□□ -0.91
PKHD1P08F94 MIR4746-201ENST00000579802 71 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 RN7SL300P-201ENST00000582522 318 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 BX088702.1-201ENST00000610784 235 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 AC245369.7-201ENST00000631386 350 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.34□□□□□ -0.91
PKHD1P08F94 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 AGGF1P1-201ENST00000509500 2073 ntBASIC9.34□□□□□ -0.91
PKHD1P08F94 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC9.34□□□□□ -0.91
PKHD1P08F94 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PKHD1P08F94 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
PKHD1P08F94 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC9.33□□□□□ -0.92
PKHD1P08F94 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 AC138761.6-201ENST00000583997 1423 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC9.33□□□□□ -0.92
PKHD1P08F94 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC9.33□□□□□ -0.92
PKHD1P08F94 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 RN7SL277P-201ENST00000481521 288 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 RN7SL288P-201ENST00000490496 291 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 INO80E-209ENST00000567254 625 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 PHF23-213ENST00000613632 850 ntTSL 5 BASIC9.33□□□□□ -0.92
PKHD1P08F94 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC9.33□□□□□ -0.92
PKHD1P08F94 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 BRD7P5-201ENST00000299197 1822 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
PKHD1P08F94 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC9.33□□□□□ -0.92
PKHD1P08F94 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC9.33□□□□□ -0.92
PKHD1P08F94 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC9.33□□□□□ -0.92
PKHD1P08F94 KNOP1P1-201ENST00000542108 989 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC9.33□□□□□ -0.92
PKHD1P08F94 WARS-232ENST00000556645 2508 ntTSL 5 BASIC9.33□□□□□ -0.92
PKHD1P08F94 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC9.33□□□□□ -0.92
PKHD1P08F94 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 CICP12-201ENST00000455801 843 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 TPT1P6-201ENST00000458298 514 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 RNA5SP406-201ENST00000516106 112 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC9.33□□□□□ -0.92
PKHD1P08F94 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PKHD1P08F94 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC9.33□□□□□ -0.92
PKHD1P08F94 FBXO36P1-201ENST00000579006 471 ntBASIC9.33□□□□□ -0.92
PKHD1P08F94 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC9.33□□□□□ -0.92
PKHD1P08F94 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PKHD1P08F94 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms