Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
THBS1P07996 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
THBS1P07996 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.94□□□□□ -0.18
THBS1P07996 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.94□□□□□ -0.18
THBS1P07996 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 SOCS2P1-201ENST00000417727 557 ntBASIC13.94□□□□□ -0.18
THBS1P07996 NME2P1-201ENST00000426182 414 ntBASIC13.94□□□□□ -0.18
THBS1P07996 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.94□□□□□ -0.18
THBS1P07996 AC114812.1-204ENST00000449669 728 ntBASIC13.94□□□□□ -0.18
THBS1P07996 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.94□□□□□ -0.18
THBS1P07996 TPT1P11-201ENST00000458482 498 ntBASIC13.94□□□□□ -0.18
THBS1P07996 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.94□□□□□ -0.18
THBS1P07996 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.94□□□□□ -0.18
THBS1P07996 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.94□□□□□ -0.18
THBS1P07996 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
THBS1P07996 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.94□□□□□ -0.18
THBS1P07996 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
THBS1P07996 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
THBS1P07996 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
THBS1P07996 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.93□□□□□ -0.18
THBS1P07996 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.93□□□□□ -0.18
THBS1P07996 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
THBS1P07996 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 AC022616.1-201ENST00000518688 554 ntBASIC13.93□□□□□ -0.18
THBS1P07996 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.93□□□□□ -0.18
THBS1P07996 AC092552.1-201ENST00000547243 906 ntBASIC13.93□□□□□ -0.18
THBS1P07996 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.93□□□□□ -0.18
THBS1P07996 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.93□□□□□ -0.18
THBS1P07996 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.93□□□□□ -0.18
THBS1P07996 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.93□□□□□ -0.18
THBS1P07996 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.93□□□□□ -0.18
THBS1P07996 AC027307.3-201ENST00000594262 1100 ntBASIC13.93□□□□□ -0.18
THBS1P07996 MIR8072-201ENST00000614241 80 ntBASIC13.93□□□□□ -0.18
THBS1P07996 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.93□□□□□ -0.18
THBS1P07996 BX640514.1-201ENST00000583223 1918 ntBASIC13.93□□□□□ -0.18
THBS1P07996 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.93□□□□□ -0.18
THBS1P07996 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
THBS1P07996 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
THBS1P07996 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms