Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR3188-201ENST00000583494 85 ntBASIC15.82■□□□□ 0.12
RB1P06400 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RB1P06400 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.82■□□□□ 0.12
RB1P06400 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 REXO1L4P-201ENST00000605109 1937 ntBASIC15.82■□□□□ 0.12
RB1P06400 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.81■□□□□ 0.12
RB1P06400 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RB1P06400 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.81■□□□□ 0.12
RB1P06400 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RB1P06400 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.81■□□□□ 0.12
RB1P06400 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RB1P06400 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.81■□□□□ 0.12
RB1P06400 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.81■□□□□ 0.12
RB1P06400 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.81■□□□□ 0.12
RB1P06400 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 AC006122.1-201ENST00000493323 440 ntBASIC15.81■□□□□ 0.12
RB1P06400 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.81■□□□□ 0.12
RB1P06400 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RB1P06400 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.81■□□□□ 0.12
RB1P06400 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RB1P06400 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.81■□□□□ 0.12
RB1P06400 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.81■□□□□ 0.12
RB1P06400 AC003102.2-201ENST00000589195 1469 ntBASIC15.81■□□□□ 0.12
RB1P06400 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 AC026691.1-201ENST00000602502 2017 ntBASIC15.81■□□□□ 0.12
RB1P06400 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.81■□□□□ 0.12
RB1P06400 AC133540.1-201ENST00000620845 1019 ntBASIC15.81■□□□□ 0.12
RB1P06400 AC025271.4-201ENST00000621477 1726 ntBASIC15.81■□□□□ 0.12
RB1P06400 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RB1P06400 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RB1P06400 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
RB1P06400 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.8■□□□□ 0.12
RB1P06400 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
RB1P06400 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RB1P06400 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.8■□□□□ 0.12
RB1P06400 RPL13AP19-201ENST00000434320 584 ntBASIC15.8■□□□□ 0.12
RB1P06400 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.8■□□□□ 0.12
RB1P06400 AP000358.1-201ENST00000456260 156 ntBASIC15.8■□□□□ 0.12
RB1P06400 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.8■□□□□ 0.12
RB1P06400 CHCHD2P9-201ENST00000461726 456 ntBASIC15.8■□□□□ 0.12
RB1P06400 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.8■□□□□ 0.12
RB1P06400 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.8■□□□□ 0.12
RB1P06400 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.8■□□□□ 0.12
RB1P06400 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
RB1P06400 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.8■□□□□ 0.12
RB1P06400 MEG3_2.1-201ENST00000611456 105 ntBASIC15.8■□□□□ 0.12
RB1P06400 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
RB1P06400 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.8■□□□□ 0.12
RB1P06400 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.8■□□□□ 0.12
RB1P06400 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RB1P06400 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.8■□□□□ 0.12
RB1P06400 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RB1P06400 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
RB1P06400 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RB1P06400 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms