Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PDGFBP01127 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PDGFBP01127 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.93□□□□□ -0.02
PDGFBP01127 RN7SKP109-201ENST00000410592 316 ntBASIC14.93□□□□□ -0.02
PDGFBP01127 KRT18P36-201ENST00000411618 1276 ntBASIC14.93□□□□□ -0.02
PDGFBP01127 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PDGFBP01127 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.93□□□□□ -0.02
PDGFBP01127 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.93□□□□□ -0.02
PDGFBP01127 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.93□□□□□ -0.02
PDGFBP01127 AC007952.4-201ENST00000573866 637 ntBASIC14.93□□□□□ -0.02
PDGFBP01127 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 MIR6816-201ENST00000620368 66 ntBASIC14.93□□□□□ -0.02
PDGFBP01127 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.93□□□□□ -0.02
PDGFBP01127 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
PDGFBP01127 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.93□□□□□ -0.02
PDGFBP01127 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PDGFBP01127 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFBP01127 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFBP01127 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.93□□□□□ -0.02
PDGFBP01127 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.93□□□□□ -0.02
PDGFBP01127 CICP11-201ENST00000434745 2827 ntBASIC14.93□□□□□ -0.02
PDGFBP01127 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PDGFBP01127 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PDGFBP01127 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PDGFBP01127 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
PDGFBP01127 GUSBP10-201ENST00000417412 665 ntBASIC14.92□□□□□ -0.02
PDGFBP01127 DUX4L50-201ENST00000455245 715 ntBASIC14.92□□□□□ -0.02
PDGFBP01127 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.92□□□□□ -0.02
PDGFBP01127 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.92□□□□□ -0.02
PDGFBP01127 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.92□□□□□ -0.02
PDGFBP01127 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.92□□□□□ -0.02
PDGFBP01127 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 FTLP5-201ENST00000586853 534 ntBASIC14.92□□□□□ -0.02
PDGFBP01127 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.92□□□□□ -0.02
PDGFBP01127 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PDGFBP01127 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PDGFBP01127 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 REXO1L2P-201ENST00000425429 2069 ntBASIC14.92□□□□□ -0.02
PDGFBP01127 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PDGFBP01127 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PDGFBP01127 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.92□□□□□ -0.02
PDGFBP01127 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.92□□□□□ -0.02
PDGFBP01127 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDGFBP01127 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFBP01127 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFBP01127 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFBP01127 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFBP01127 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PDGFBP01127 AC022211.2-201ENST00000585075 2527 ntBASIC14.91□□□□□ -0.02
PDGFBP01127 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 AC004554.1-201ENST00000422830 1468 ntBASIC14.91□□□□□ -0.02
PDGFBP01127 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDGFBP01127 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFBP01127 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PDGFBP01127 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.91□□□□□ -0.02
PDGFBP01127 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.91□□□□□ -0.02
PDGFBP01127 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFBP01127 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms