Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.02■□□□□ 0.16
TIMP1P01033 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.02■□□□□ 0.16
TIMP1P01033 OR2R1P-201ENST00000441404 914 ntBASIC16.02■□□□□ 0.16
TIMP1P01033 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.02■□□□□ 0.16
TIMP1P01033 RN7SL396P-201ENST00000471086 295 ntBASIC16.02■□□□□ 0.16
TIMP1P01033 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.02■□□□□ 0.16
TIMP1P01033 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.02■□□□□ 0.16
TIMP1P01033 RNA5SP417-201ENST00000516459 108 ntBASIC16.02■□□□□ 0.16
TIMP1P01033 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.02■□□□□ 0.16
TIMP1P01033 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC16.02■□□□□ 0.16
TIMP1P01033 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.02■□□□□ 0.16
TIMP1P01033 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.02■□□□□ 0.16
TIMP1P01033 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.02■□□□□ 0.16
TIMP1P01033 AC007292.2-201ENST00000593524 1812 ntBASIC16.02■□□□□ 0.16
TIMP1P01033 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.02■□□□□ 0.15
TIMP1P01033 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.02■□□□□ 0.15
TIMP1P01033 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
TIMP1P01033 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TIMP1P01033 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.02■□□□□ 0.15
TIMP1P01033 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TIMP1P01033 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TIMP1P01033 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.01■□□□□ 0.15
TIMP1P01033 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
TIMP1P01033 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 KRT17P5-201ENST00000332088 839 ntBASIC16.01■□□□□ 0.15
TIMP1P01033 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 GUSBP10-201ENST00000417412 665 ntBASIC16.01■□□□□ 0.15
TIMP1P01033 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.01■□□□□ 0.15
TIMP1P01033 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.01■□□□□ 0.15
TIMP1P01033 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.01■□□□□ 0.15
TIMP1P01033 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 HERC2P11-201ENST00000562845 725 ntBASIC16.01■□□□□ 0.15
TIMP1P01033 AC100756.2-201ENST00000569537 736 ntBASIC16.01■□□□□ 0.15
TIMP1P01033 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.01■□□□□ 0.15
TIMP1P01033 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.01■□□□□ 0.15
TIMP1P01033 AC002472.4-201ENST00000641915 272 ntBASIC16.01■□□□□ 0.15
TIMP1P01033 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.01■□□□□ 0.15
TIMP1P01033 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.01■□□□□ 0.15
TIMP1P01033 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 REXO1L2P-201ENST00000425429 2069 ntBASIC16.01■□□□□ 0.15
TIMP1P01033 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TIMP1P01033 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16■□□□□ 0.15
TIMP1P01033 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16■□□□□ 0.15
TIMP1P01033 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16■□□□□ 0.15
TIMP1P01033 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16■□□□□ 0.15
TIMP1P01033 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16■□□□□ 0.15
TIMP1P01033 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TIMP1P01033 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 AC013726.1-201ENST00000563747 2285 ntBASIC16■□□□□ 0.15
TIMP1P01033 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TIMP1P01033 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16■□□□□ 0.15
TIMP1P01033 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16■□□□□ 0.15
TIMP1P01033 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16■□□□□ 0.15
TIMP1P01033 AC012158.2-201ENST00000536546 354 ntBASIC16■□□□□ 0.15
TIMP1P01033 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16■□□□□ 0.15
TIMP1P01033 AC148477.9-201ENST00000623974 539 ntBASIC16■□□□□ 0.15
TIMP1P01033 AL451007.2-201ENST00000632004 563 ntBASIC16■□□□□ 0.15
TIMP1P01033 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16■□□□□ 0.15
TIMP1P01033 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TIMP1P01033 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16■□□□□ 0.15
TIMP1P01033 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16■□□□□ 0.15
TIMP1P01033 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16■□□□□ 0.15
TIMP1P01033 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TIMP1P01033 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TIMP1P01033 NKILA-202ENST00000614771 2598 ntBASIC15.99■□□□□ 0.15
TIMP1P01033 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms