Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.7□□□□□ -0.38
SIX6O95475 AC111170.3-201ENST00000624282 2464 ntBASIC12.7□□□□□ -0.38
SIX6O95475 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SIX6O95475 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SIX6O95475 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.7□□□□□ -0.38
SIX6O95475 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.7□□□□□ -0.38
SIX6O95475 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.7□□□□□ -0.38
SIX6O95475 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SIX6O95475 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SIX6O95475 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.7□□□□□ -0.38
SIX6O95475 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.7□□□□□ -0.38
SIX6O95475 AC108073.2-201ENST00000464002 357 ntBASIC12.7□□□□□ -0.38
SIX6O95475 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.7□□□□□ -0.38
SIX6O95475 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.7□□□□□ -0.38
SIX6O95475 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.7□□□□□ -0.38
SIX6O95475 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SIX6O95475 SPTSSB-204ENST00000617024 1292 ntBASIC12.7□□□□□ -0.38
SIX6O95475 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SIX6O95475 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 PCDHB18P-202ENST00000526308 3197 ntBASIC12.7□□□□□ -0.38
SIX6O95475 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.7□□□□□ -0.38
SIX6O95475 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SIX6O95475 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SIX6O95475 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 AC090505.1-201ENST00000430515 1834 ntBASIC12.69□□□□□ -0.38
SIX6O95475 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 CYP4F24P-201ENST00000586049 1580 ntBASIC12.69□□□□□ -0.38
SIX6O95475 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SIX6O95475 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.69□□□□□ -0.38
SIX6O95475 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.69□□□□□ -0.38
SIX6O95475 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.69□□□□□ -0.38
SIX6O95475 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.69□□□□□ -0.38
SIX6O95475 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
SIX6O95475 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.69□□□□□ -0.38
SIX6O95475 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.69□□□□□ -0.38
SIX6O95475 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.69□□□□□ -0.38
SIX6O95475 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SIX6O95475 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SIX6O95475 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms