Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.27■□□□□ 0.04
PRAMEF11O60813 OR10B1P-201ENST00000601666 907 ntBASIC15.27■□□□□ 0.04
PRAMEF11O60813 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRAMEF11O60813 AC008687.7-202ENST00000637404 953 ntBASIC15.27■□□□□ 0.04
PRAMEF11O60813 COX11-210ENST00000639671 696 ntBASIC15.27■□□□□ 0.04
PRAMEF11O60813 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PRAMEF11O60813 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
PRAMEF11O60813 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PRAMEF11O60813 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRAMEF11O60813 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 MIR658-201ENST00000385210 100 ntBASIC15.26■□□□□ 0.03
PRAMEF11O60813 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF11O60813 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF11O60813 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 AC020910.5-201ENST00000623668 1865 ntBASIC15.25■□□□□ 0.03
PRAMEF11O60813 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 AL596257.1-201ENST00000641463 2694 ntBASIC15.25■□□□□ 0.03
PRAMEF11O60813 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 AC103702.1-201ENST00000548801 2630 ntBASIC15.25■□□□□ 0.03
PRAMEF11O60813 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF11O60813 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 RN7SKP175-201ENST00000408472 289 ntBASIC15.25■□□□□ 0.03
PRAMEF11O60813 AC099336.1-201ENST00000417053 1171 ntBASIC15.25■□□□□ 0.03
PRAMEF11O60813 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF11O60813 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms