Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
E2F3O00716 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.77□□□□□ -0.05
E2F3O00716 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
E2F3O00716 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
E2F3O00716 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 AL391825.1-201ENST00000457671 1364 ntBASIC14.76□□□□□ -0.05
E2F3O00716 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
E2F3O00716 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 AL512384.1-201ENST00000406683 331 ntBASIC14.76□□□□□ -0.05
E2F3O00716 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.76□□□□□ -0.05
E2F3O00716 MEP1AP4-201ENST00000423244 1087 ntBASIC14.76□□□□□ -0.05
E2F3O00716 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.76□□□□□ -0.05
E2F3O00716 RPL13AP25-201ENST00000484130 612 ntBASIC14.76□□□□□ -0.05
E2F3O00716 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 AC093004.1-201ENST00000508850 424 ntBASIC14.76□□□□□ -0.05
E2F3O00716 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.76□□□□□ -0.05
E2F3O00716 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
E2F3O00716 AC093813.1-201ENST00000605066 256 ntBASIC14.76□□□□□ -0.05
E2F3O00716 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.76□□□□□ -0.05
E2F3O00716 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
E2F3O00716 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
E2F3O00716 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
E2F3O00716 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
E2F3O00716 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
E2F3O00716 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
E2F3O00716 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
E2F3O00716 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
E2F3O00716 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 AC018665.1-201ENST00000622927 1362 ntBASIC14.75□□□□□ -0.05
E2F3O00716 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.75□□□□□ -0.05
E2F3O00716 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
E2F3O00716 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
E2F3O00716 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
E2F3O00716 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
E2F3O00716 AC087499.6-201ENST00000411576 835 ntBASIC14.75□□□□□ -0.05
E2F3O00716 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 RN7SL752P-201ENST00000463779 287 ntBASIC14.75□□□□□ -0.05
E2F3O00716 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.75□□□□□ -0.05
E2F3O00716 CHCHD2P3-201ENST00000603038 451 ntBASIC14.75□□□□□ -0.05
E2F3O00716 AC008494.3-201ENST00000606615 944 ntBASIC14.75□□□□□ -0.05
E2F3O00716 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 PRSS30P-206ENST00000641773 873 ntBASIC14.75□□□□□ -0.05
E2F3O00716 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms