Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.58□□□□□ -0.08
SLC28A1O00337 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
SLC28A1O00337 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.58□□□□□ -0.08
SLC28A1O00337 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SLC28A1O00337 AC138649.4-201ENST00000612222 287 ntBASIC14.58□□□□□ -0.08
SLC28A1O00337 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC28A1O00337 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SLC28A1O00337 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC28A1O00337 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
SLC28A1O00337 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 KRT18P28-201ENST00000453838 1332 ntBASIC14.58□□□□□ -0.08
SLC28A1O00337 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SLC28A1O00337 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC28A1O00337 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC28A1O00337 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC28A1O00337 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SLC28A1O00337 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SLC28A1O00337 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC28A1O00337 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SLC28A1O00337 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC28A1O00337 AC097359.2-201ENST00000604992 2389 ntBASIC14.58□□□□□ -0.08
SLC28A1O00337 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.58□□□□□ -0.08
SLC28A1O00337 AP001267.2-201ENST00000532619 2086 ntBASIC14.57□□□□□ -0.08
SLC28A1O00337 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 AC055811.4-201ENST00000624039 1754 ntBASIC14.57□□□□□ -0.08
SLC28A1O00337 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 HSPA7-201ENST00000445535 1927 ntBASIC14.57□□□□□ -0.08
SLC28A1O00337 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC28A1O00337 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 AL512638.1-201ENST00000457493 794 ntBASIC14.57□□□□□ -0.08
SLC28A1O00337 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 AC004890.2-204ENST00000481968 304 ntBASIC14.57□□□□□ -0.08
SLC28A1O00337 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.57□□□□□ -0.08
SLC28A1O00337 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC28A1O00337 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.57□□□□□ -0.08
SLC28A1O00337 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC28A1O00337 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC28A1O00337 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 AC023090.2-201ENST00000625182 2110 ntBASIC14.57□□□□□ -0.08
SLC28A1O00337 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC28A1O00337 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC28A1O00337 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC28A1O00337 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms