Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPBD1B2RD01 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.9□□□□□ -0.18
CENPBD1B2RD01 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CENPBD1B2RD01 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CENPBD1B2RD01 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CENPBD1B2RD01 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.9□□□□□ -0.19
CENPBD1B2RD01 AC100757.3-201ENST00000622361 1406 ntBASIC13.9□□□□□ -0.19
CENPBD1B2RD01 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CENPBD1B2RD01 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.89□□□□□ -0.19
CENPBD1B2RD01 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 AL844908.2-201ENST00000609461 460 ntBASIC13.89□□□□□ -0.19
CENPBD1B2RD01 AL590560.3-201ENST00000623350 461 ntBASIC13.89□□□□□ -0.19
CENPBD1B2RD01 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 AC091951.1-201ENST00000512854 2465 ntBASIC13.89□□□□□ -0.19
CENPBD1B2RD01 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 AC067750.1-201ENST00000608826 6545 ntBASIC13.89□□□□□ -0.19
CENPBD1B2RD01 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CENPBD1B2RD01 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 MIR943-201ENST00000401286 94 ntBASIC13.88□□□□□ -0.19
CENPBD1B2RD01 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 KRT18P43-201ENST00000469825 1281 ntBASIC13.88□□□□□ -0.19
CENPBD1B2RD01 AC092337.1-201ENST00000568699 1129 ntBASIC13.88□□□□□ -0.19
CENPBD1B2RD01 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 AC023024.2-201ENST00000623561 1993 ntBASIC13.88□□□□□ -0.19
CENPBD1B2RD01 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CENPBD1B2RD01 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms