Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.86■■□□□ 1.73
PCDHA2Q9Y5H9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA2Q9Y5H9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA2Q9Y5H9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 AL356740.2-201ENST00000601559 647 ntBASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA2Q9Y5H9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PCDHA2Q9Y5H9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHA2Q9Y5H9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
PCDHA2Q9Y5H9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.84■■□□□ 1.73
PCDHA2Q9Y5H9 HLA-L-211ENST00000482052 1765 ntBASIC25.84■■□□□ 1.73
PCDHA2Q9Y5H9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHA2Q9Y5H9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 LINC01124-201ENST00000409786 2117 ntBASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 SNX5-217ENST00000606557 1087 ntBASIC25.83■■□□□ 1.73
PCDHA2Q9Y5H9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PCDHA2Q9Y5H9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PCDHA2Q9Y5H9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA2Q9Y5H9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA2Q9Y5H9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHA2Q9Y5H9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA2Q9Y5H9 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHA2Q9Y5H9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHA2Q9Y5H9 MIR6722-201ENST00000617286 78 ntBASIC25.81■■□□□ 1.72
PCDHA2Q9Y5H9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHA2Q9Y5H9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA2Q9Y5H9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA2Q9Y5H9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDHA2Q9Y5H9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.79■■□□□ 1.72
PCDHA2Q9Y5H9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHA2Q9Y5H9 LINC00543-201ENST00000567234 1845 ntBASIC25.79■■□□□ 1.72
PCDHA2Q9Y5H9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PCDHA2Q9Y5H9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
PCDHA2Q9Y5H9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 AL136116.3-201ENST00000402907 1138 ntBASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHA2Q9Y5H9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHA2Q9Y5H9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
PCDHA2Q9Y5H9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
PCDHA2Q9Y5H9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHA2Q9Y5H9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHA2Q9Y5H9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHA2Q9Y5H9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.76■■□□□ 1.71
PCDHA2Q9Y5H9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.76■■□□□ 1.71
PCDHA2Q9Y5H9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHA2Q9Y5H9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHA2Q9Y5H9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHA2Q9Y5H9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
PCDHA2Q9Y5H9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms