Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 TSPY9P-201ENST00000440215 945 ntBASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 TSPY11P-201ENST00000442607 1045 ntBASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA7Q9Y5G6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 AC092028.1-203ENST00000608262 953 ntBASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGA7Q9Y5G6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 MIR638-201ENST00000385237 100 ntBASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.74■■□□□ 1.23
PCDHGA7Q9Y5G6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA7Q9Y5G6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA7Q9Y5G6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA7Q9Y5G6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
PCDHGA7Q9Y5G6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDHGA7Q9Y5G6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDHGA7Q9Y5G6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA7Q9Y5G6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA7Q9Y5G6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA7Q9Y5G6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGA7Q9Y5G6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA7Q9Y5G6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGA7Q9Y5G6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHGA7Q9Y5G6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHGA7Q9Y5G6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PCDHGA7Q9Y5G6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGA7Q9Y5G6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 AL139246.5-201ENST00000606645 996 ntBASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGA7Q9Y5G6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDHGA7Q9Y5G6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA7Q9Y5G6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA7Q9Y5G6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA7Q9Y5G6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.7■■□□□ 1.22
PCDHGA7Q9Y5G6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDHGA7Q9Y5G6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.7■■□□□ 1.22
PCDHGA7Q9Y5G6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA7Q9Y5G6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PCDHGA7Q9Y5G6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA7Q9Y5G6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA7Q9Y5G6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA7Q9Y5G6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA7Q9Y5G6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGA7Q9Y5G6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
PCDHGA7Q9Y5G6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 MIR4281-201ENST00000580852 62 ntBASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA7Q9Y5G6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 AC131281.2-201ENST00000520478 145 ntBASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA7Q9Y5G6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms