Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALYQ9NYX4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALYQ9NYX4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CALYQ9NYX4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.01■□□□□ 0.63
CALYQ9NYX4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.01■□□□□ 0.63
CALYQ9NYX4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CALYQ9NYX4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALYQ9NYX4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CALYQ9NYX4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CALYQ9NYX4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CALYQ9NYX4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CALYQ9NYX4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CALYQ9NYX4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CALYQ9NYX4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CALYQ9NYX4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19■□□□□ 0.63
CALYQ9NYX4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CALYQ9NYX4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CALYQ9NYX4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19■□□□□ 0.63
CALYQ9NYX4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.99■□□□□ 0.63
CALYQ9NYX4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.99■□□□□ 0.63
CALYQ9NYX4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.99■□□□□ 0.63
CALYQ9NYX4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CALYQ9NYX4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALYQ9NYX4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.99■□□□□ 0.63
CALYQ9NYX4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.99■□□□□ 0.63
CALYQ9NYX4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CALYQ9NYX4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CALYQ9NYX4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.98■□□□□ 0.63
CALYQ9NYX4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALYQ9NYX4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CALYQ9NYX4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.98■□□□□ 0.63
CALYQ9NYX4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.98■□□□□ 0.63
CALYQ9NYX4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALYQ9NYX4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALYQ9NYX4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALYQ9NYX4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.98■□□□□ 0.63
CALYQ9NYX4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CALYQ9NYX4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALYQ9NYX4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALYQ9NYX4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALYQ9NYX4 AC131274.2-201ENST00000580697 1507 ntBASIC18.97■□□□□ 0.63
CALYQ9NYX4 AC103724.3-201ENST00000564481 992 ntBASIC18.97■□□□□ 0.63
CALYQ9NYX4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CALYQ9NYX4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CALYQ9NYX4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CALYQ9NYX4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CALYQ9NYX4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALYQ9NYX4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.96■□□□□ 0.63
CALYQ9NYX4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALYQ9NYX4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALYQ9NYX4 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.96■□□□□ 0.63
CALYQ9NYX4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.96■□□□□ 0.63
CALYQ9NYX4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.96■□□□□ 0.63
CALYQ9NYX4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALYQ9NYX4 AF131216.4-201ENST00000638924 1588 ntBASIC18.96■□□□□ 0.63
CALYQ9NYX4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.96■□□□□ 0.63
CALYQ9NYX4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.95■□□□□ 0.62
CALYQ9NYX4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CALYQ9NYX4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALYQ9NYX4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALYQ9NYX4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALYQ9NYX4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALYQ9NYX4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.94■□□□□ 0.62
CALYQ9NYX4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CALYQ9NYX4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALYQ9NYX4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.94■□□□□ 0.62
CALYQ9NYX4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALYQ9NYX4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALYQ9NYX4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALYQ9NYX4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.93■□□□□ 0.62
CALYQ9NYX4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALYQ9NYX4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALYQ9NYX4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALYQ9NYX4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALYQ9NYX4 AL031848.2-201ENST00000607670 837 ntBASIC18.93■□□□□ 0.62
CALYQ9NYX4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.93■□□□□ 0.62
CALYQ9NYX4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CALYQ9NYX4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.92■□□□□ 0.62
CALYQ9NYX4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
CALYQ9NYX4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.92■□□□□ 0.62
CALYQ9NYX4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CALYQ9NYX4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.92■□□□□ 0.62
CALYQ9NYX4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms