Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 BHLHE23-202ENST00000612929 1109 ntBASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
POPDC3Q9HBV1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
POPDC3Q9HBV1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
POPDC3Q9HBV1 TSPY13P-201ENST00000338964 914 ntBASIC22.65■■□□□ 1.22
POPDC3Q9HBV1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.65■■□□□ 1.22
POPDC3Q9HBV1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.65■■□□□ 1.22
POPDC3Q9HBV1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
POPDC3Q9HBV1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
POPDC3Q9HBV1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
POPDC3Q9HBV1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
POPDC3Q9HBV1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
POPDC3Q9HBV1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.64■■□□□ 1.22
POPDC3Q9HBV1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
POPDC3Q9HBV1 AC131274.2-201ENST00000580697 1507 ntBASIC22.64■■□□□ 1.21
POPDC3Q9HBV1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
POPDC3Q9HBV1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
POPDC3Q9HBV1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
POPDC3Q9HBV1 KRT18P24-201ENST00000344739 1156 ntBASIC22.63■■□□□ 1.21
POPDC3Q9HBV1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
POPDC3Q9HBV1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.63■■□□□ 1.21
POPDC3Q9HBV1 AC120024.1-201ENST00000562672 995 ntBASIC22.63■■□□□ 1.21
POPDC3Q9HBV1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
POPDC3Q9HBV1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
POPDC3Q9HBV1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.62■■□□□ 1.21
POPDC3Q9HBV1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 PVT1_1.1-201ENST00000615125 194 ntBASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
POPDC3Q9HBV1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
POPDC3Q9HBV1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
POPDC3Q9HBV1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 THA1P-201ENST00000590384 1145 ntBASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 AC012354.3-201ENST00000623734 483 ntBASIC22.58■■□□□ 1.21
POPDC3Q9HBV1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
POPDC3Q9HBV1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
POPDC3Q9HBV1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
POPDC3Q9HBV1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
POPDC3Q9HBV1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 AC012676.1-201ENST00000574705 1949 ntBASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
POPDC3Q9HBV1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms