Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A2Q9H9S3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.51■□□□□ 0.87
SEC61A2Q9H9S3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEC61A2Q9H9S3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 AC022616.5-201ENST00000518796 181 ntBASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC61A2Q9H9S3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC61A2Q9H9S3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC61A2Q9H9S3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEC61A2Q9H9S3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC61A2Q9H9S3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 AL031848.2-201ENST00000607670 837 ntBASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC61A2Q9H9S3 AC004812.2-201ENST00000611079 2094 ntBASIC20.47■□□□□ 0.87
SEC61A2Q9H9S3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A2Q9H9S3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.47■□□□□ 0.87
SEC61A2Q9H9S3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A2Q9H9S3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
SEC61A2Q9H9S3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SEC61A2Q9H9S3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.47■□□□□ 0.87
SEC61A2Q9H9S3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SEC61A2Q9H9S3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.46■□□□□ 0.87
SEC61A2Q9H9S3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC61A2Q9H9S3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SEC61A2Q9H9S3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC61A2Q9H9S3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SEC61A2Q9H9S3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SEC61A2Q9H9S3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 AC009299.2-201ENST00000482477 511 ntBASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 AC120024.1-201ENST00000562672 995 ntBASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 AC011551.1-201ENST00000614101 683 ntBASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SEC61A2Q9H9S3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.44■□□□□ 0.86
SEC61A2Q9H9S3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 AL035685.1-201ENST00000636663 812 ntBASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEC61A2Q9H9S3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEC61A2Q9H9S3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEC61A2Q9H9S3 THA1P-201ENST00000590384 1145 ntBASIC20.41■□□□□ 0.86
SEC61A2Q9H9S3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SEC61A2Q9H9S3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.41■□□□□ 0.86
SEC61A2Q9H9S3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
SEC61A2Q9H9S3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEC61A2Q9H9S3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms