Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC38A1Q9H2H9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A1Q9H2H9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A1Q9H2H9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A1Q9H2H9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A1Q9H2H9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC38A1Q9H2H9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.29■■□□□ 1
SLC38A1Q9H2H9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.29■■□□□ 1
SLC38A1Q9H2H9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A1Q9H2H9 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.29■■□□□ 1
SLC38A1Q9H2H9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A1Q9H2H9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A1Q9H2H9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC38A1Q9H2H9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 AC010980.1-201ENST00000587192 1142 ntBASIC21.28■■□□□ 1
SLC38A1Q9H2H9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC38A1Q9H2H9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 AL022069.1-201ENST00000568025 1636 ntBASIC21.27■■□□□ 1
SLC38A1Q9H2H9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 AC120024.1-201ENST00000562672 995 ntBASIC21.27■■□□□ 1
SLC38A1Q9H2H9 AC012354.3-201ENST00000623734 483 ntBASIC21.27■■□□□ 1
SLC38A1Q9H2H9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC38A1Q9H2H9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC38A1Q9H2H9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC38A1Q9H2H9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SLC38A1Q9H2H9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 AC131274.2-201ENST00000580697 1507 ntBASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC38A1Q9H2H9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 DUSP8P5-201ENST00000422884 1815 ntBASIC21.25■□□□□ 0.99
SLC38A1Q9H2H9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC38A1Q9H2H9 KRT18P24-201ENST00000344739 1156 ntBASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC38A1Q9H2H9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC38A1Q9H2H9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC38A1Q9H2H9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC38A1Q9H2H9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC38A1Q9H2H9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC38A1Q9H2H9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC38A1Q9H2H9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC38A1Q9H2H9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC38A1Q9H2H9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms