Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 EIF2S2P2-201ENST00000447161 982 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 UPF3AP2-201ENST00000457924 1132 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 AL049829.1-201ENST00000465411 156 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 NPM1P43-201ENST00000558669 786 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 RPP40P2-201ENST00000603596 712 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 DUX4L11-201ENST00000611504 1267 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 DUX4L12-201ENST00000614593 1267 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 AC026585.1-201ENST00000619582 524 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 DUX4L14-201ENST00000621227 1267 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 AC009269.6-201ENST00000621778 588 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 CR559946.2-201ENST00000623684 991 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 RPL23AP49-202ENST00000638439 1138 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 OR6C71P-202ENST00000641886 1107 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 EFCAB10-205ENST00000486180 1550 ntAPPRIS P5 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 CIR1P2-201ENST00000514821 1342 ntBASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRTAP4-4Q9BYR3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 MTND4P4-201ENST00000439033 1366 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AP000526.1-201ENST00000603308 1388 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 RNU6-304P-201ENST00000364855 107 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AL390039.1-201ENST00000399148 611 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 OR13Z1P-201ENST00000416141 834 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 MTND2P15-201ENST00000418575 892 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 ATP5C1P1-201ENST00000441945 895 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 KIZ-AS1-202ENST00000443753 1161 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AC137794.1-201ENST00000509185 914 ntTSL 5 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 MTCYBP27-201ENST00000555160 670 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 MIR3648-2-201ENST00000581792 180 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AL353621.2-201ENST00000605340 133 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AL031775.1-201ENST00000607014 887 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 AC024933.1-201ENST00000608472 348 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 MIR3648-1-201ENST00000615959 180 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 ABCB10P1-201ENST00000614297 2181 ntBASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC4.68□□□□□ -1.66
KRTAP4-4Q9BYR3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP4-4Q9BYR3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP4-4Q9BYR3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KRTAP4-4Q9BYR3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
KRTAP4-4Q9BYR3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms