RNA–Protein interactions for RNA: ENST00000603596.1

RPP40P2-201, Transcript of ribonuclease P/MRP subunit p40 pseudogene 2, humanhuman

BASIC

Gene RPP40P2, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40P2-201ENST00000603596 AEBP2Q6ZN18 517 aaPredicted RBP29.8■■■□□ 2.36
RPP40P2-201ENST00000603596 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
RPP40P2-201ENST00000603596 SENP3Q9H4L4 574 aaPredicted RBP25.55■■□□□ 1.68
RPP40P2-201ENST00000603596 PHF23Q9BUL5 403 aaPredicted RBP25.1■■□□□ 1.61
RPP40P2-201ENST00000603596 FOXD1Q16676 465 aa23.88■■□□□ 1.41
RPP40P2-201ENST00000603596 POTEDQ86YR6 584 aa23.27■■□□□ 1.32
RPP40P2-201ENST00000603596 MSH5O43196 834 aa22.63■■□□□ 1.21
RPP40P2-201ENST00000603596 PIAS4Q8N2W9 510 aaPredicted RBP22.14■■□□□ 1.13
RPP40P2-201ENST00000603596 PPP6R1Q9UPN7 881 aa21.79■■□□□ 1.08
RPP40P2-201ENST00000603596 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
RPP40P2-201ENST00000603596 ADRA2BP18089 450 aa21.66■■□□□ 1.06
RPP40P2-201ENST00000603596 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
RPP40P2-201ENST00000603596 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
RPP40P2-201ENST00000603596 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
RPP40P2-201ENST00000603596 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
RPP40P2-201ENST00000603596 DCAF8L1A6NGE4 600 aa19.31■□□□□ 0.68
RPP40P2-201ENST00000603596 RNF39Q9H2S5 420 aa19.25■□□□□ 0.67
RPP40P2-201ENST00000603596 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
RPP40P2-201ENST00000603596 PPP4R3CPQ6ZMV5 832 aa18.97■□□□□ 0.63
RPP40P2-201ENST00000603596 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
RPP40P2-201ENST00000603596 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
RPP40P2-201ENST00000603596 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
RPP40P2-201ENST00000603596 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
RPP40P2-201ENST00000603596 KCNA4P22459 653 aa18.43■□□□□ 0.54
RPP40P2-201ENST00000603596 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
RPP40P2-201ENST00000603596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.5
RPP40P2-201ENST00000603596 POTEHQ6S545 545 aa18.1■□□□□ 0.49
RPP40P2-201ENST00000603596 NPM3O75607 178 aaKnown RBP18.08■□□□□ 0.48
RPP40P2-201ENST00000603596 DSG3P32926 999 aa17.79■□□□□ 0.44
RPP40P2-201ENST00000603596 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
RPP40P2-201ENST00000603596 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
RPP40P2-201ENST00000603596 CAPN15O75808 1086 aa17.69■□□□□ 0.42
RPP40P2-201ENST00000603596 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
RPP40P2-201ENST00000603596 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
RPP40P2-201ENST00000603596 ABCB7O75027 752 aa17.21■□□□□ 0.35
RPP40P2-201ENST00000603596 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
RPP40P2-201ENST00000603596 APLP2Q06481 763 aa17.2■□□□□ 0.34
RPP40P2-201ENST00000603596 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
RPP40P2-201ENST00000603596 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
RPP40P2-201ENST00000603596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
RPP40P2-201ENST00000603596 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
RPP40P2-201ENST00000603596 ZBTB22O15209 634 aa16.99■□□□□ 0.31
RPP40P2-201ENST00000603596 RBM42Q9BTD8 480 aaKnown RBP16.99■□□□□ 0.31
RPP40P2-201ENST00000603596 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
RPP40P2-201ENST00000603596 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
RPP40P2-201ENST00000603596 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
RPP40P2-201ENST00000603596 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
RPP40P2-201ENST00000603596 SP7Q8TDD2 431 aaPredicted RBP16.64■□□□□ 0.25
RPP40P2-201ENST00000603596 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
RPP40P2-201ENST00000603596 POLA2Q14181 598 aa16.63■□□□□ 0.25
RPP40P2-201ENST00000603596 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
RPP40P2-201ENST00000603596 PIP4P2Q8N4L2 257 aa16.33■□□□□ 0.2
RPP40P2-201ENST00000603596 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
RPP40P2-201ENST00000603596 REM2Q8IYK8 340 aaPredicted RBP16.29■□□□□ 0.2
RPP40P2-201ENST00000603596 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
RPP40P2-201ENST00000603596 ATXN8OSP0DMR3 200 aa16.24■□□□□ 0.19
RPP40P2-201ENST00000603596 HAX1O00165 279 aa16.21■□□□□ 0.19
RPP40P2-201ENST00000603596 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.17
RPP40P2-201ENST00000603596 PITPNM1O00562 1244 aa16.13■□□□□ 0.17
RPP40P2-201ENST00000603596 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
RPP40P2-201ENST00000603596 EVX2Q03828 476 aa15.97■□□□□ 0.15
RPP40P2-201ENST00000603596 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
RPP40P2-201ENST00000603596 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
RPP40P2-201ENST00000603596 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
RPP40P2-201ENST00000603596 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
RPP40P2-201ENST00000603596 C19orf67A6NJJ6 358 aa15.65■□□□□ 0.1
RPP40P2-201ENST00000603596 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
RPP40P2-201ENST00000603596 LHX8Q68G74 356 aa15.59■□□□□ 0.09
RPP40P2-201ENST00000603596 SPDYE1Q8NFV5 336 aaPredicted RBP15.59■□□□□ 0.09
RPP40P2-201ENST00000603596 GABBR2O75899 941 aa15.57■□□□□ 0.08
RPP40P2-201ENST00000603596 CLEC11AQ9Y240 323 aa15.57■□□□□ 0.08
RPP40P2-201ENST00000603596 FBLN2P98095 1184 aa15.54■□□□□ 0.08
RPP40P2-201ENST00000603596 SSUH2Q9Y2M2 353 aa15.42■□□□□ 0.06
RPP40P2-201ENST00000603596 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
RPP40P2-201ENST00000603596 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
RPP40P2-201ENST00000603596 POTEIP0CG38 1075 aa15.25■□□□□ 0.03
RPP40P2-201ENST00000603596 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
RPP40P2-201ENST00000603596 FKBP8Q14318 412 aa15.21■□□□□ 0.03
RPP40P2-201ENST00000603596 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
RPP40P2-201ENST00000603596 CD44P16070 742 aaKnown RBP15.16■□□□□ 0.02
RPP40P2-201ENST00000603596 PLSCR2Q9NRY7 297 aa15.14■□□□□ 0.01
RPP40P2-201ENST00000603596 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
RPP40P2-201ENST00000603596 CLCN6P51797 869 aa15.12■□□□□ 0.01
RPP40P2-201ENST00000603596 FARP1Q9Y4F1 1045 aaPredicted RBP15.08■□□□□ 0
RPP40P2-201ENST00000603596 DCBLD2Q96PD2 775 aa15□□□□□ -0.01
RPP40P2-201ENST00000603596 PROM2Q8N271 834 aa14.91□□□□□ -0.02
RPP40P2-201ENST00000603596 ZNF579Q8NAF0 562 aaKnown RBP14.91□□□□□ -0.02
RPP40P2-201ENST00000603596 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
RPP40P2-201ENST00000603596 OTUD5Q96G74 571 aa14.82□□□□□ -0.04
RPP40P2-201ENST00000603596 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
RPP40P2-201ENST00000603596 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
RPP40P2-201ENST00000603596 POTEMA6NI47 508 aa14.71□□□□□ -0.05
RPP40P2-201ENST00000603596 CREBZFQ9NS37 354 aa14.7□□□□□ -0.06
RPP40P2-201ENST00000603596 POTEGQ6S5H5 508 aa14.64□□□□□ -0.07
RPP40P2-201ENST00000603596 STAG3Q9UJ98 1225 aa14.59□□□□□ -0.07
RPP40P2-201ENST00000603596 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
RPP40P2-201ENST00000603596 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
RPP40P2-201ENST00000603596 PHF12Q96QT6 1004 aa14.55□□□□□ -0.08
RPP40P2-201ENST00000603596 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
RPP40P2-201ENST00000603596 PCDH10Q9P2E7 1040 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms