Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.38■□□□□ 0.69
HDHD3Q9BSH5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 SPCS2P3-201ENST00000500401 656 ntBASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDHD3Q9BSH5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 RPS2P7-201ENST00000447334 885 ntBASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDHD3Q9BSH5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDHD3Q9BSH5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 AC090877.2-201ENST00000558441 1738 ntBASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 AL592293.1-201ENST00000502889 1188 ntBASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDHD3Q9BSH5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HDHD3Q9BSH5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDHD3Q9BSH5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HDHD3Q9BSH5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDHD3Q9BSH5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.33■□□□□ 0.69
HDHD3Q9BSH5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDHD3Q9BSH5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
HDHD3Q9BSH5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.33■□□□□ 0.68
HDHD3Q9BSH5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDHD3Q9BSH5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDHD3Q9BSH5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HDHD3Q9BSH5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HDHD3Q9BSH5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HDHD3Q9BSH5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HDHD3Q9BSH5 AC079834.2-201ENST00000609776 1949 ntBASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 ANOS2P-203ENST00000472227 1816 ntBASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 AC018755.3-202ENST00000596210 929 ntBASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.31■□□□□ 0.68
HDHD3Q9BSH5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 RNF126P1-201ENST00000567452 1320 ntBASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDHD3Q9BSH5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDHD3Q9BSH5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
HDHD3Q9BSH5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms