Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCC1Q96S66 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCC1Q96S66 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCC1Q96S66 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCC1Q96S66 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCC1Q96S66 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLCC1Q96S66 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.15■□□□□ 0.66
CLCC1Q96S66 AC097639.1-201ENST00000565519 1891 ntBASIC19.15■□□□□ 0.66
CLCC1Q96S66 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLCC1Q96S66 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCC1Q96S66 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLCC1Q96S66 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLCC1Q96S66 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCC1Q96S66 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCC1Q96S66 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCC1Q96S66 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCC1Q96S66 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCC1Q96S66 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLCC1Q96S66 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.14■□□□□ 0.65
CLCC1Q96S66 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCC1Q96S66 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCC1Q96S66 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLCC1Q96S66 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.14■□□□□ 0.65
CLCC1Q96S66 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLCC1Q96S66 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCC1Q96S66 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCC1Q96S66 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CLCC1Q96S66 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCC1Q96S66 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.13■□□□□ 0.65
CLCC1Q96S66 AC026202.3-201ENST00000600805 1127 ntBASIC19.13■□□□□ 0.65
CLCC1Q96S66 AC133552.2-201ENST00000619106 1032 ntBASIC19.13■□□□□ 0.65
CLCC1Q96S66 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCC1Q96S66 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCC1Q96S66 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCC1Q96S66 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CLCC1Q96S66 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCC1Q96S66 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLCC1Q96S66 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCC1Q96S66 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCC1Q96S66 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCC1Q96S66 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCC1Q96S66 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCC1Q96S66 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLCC1Q96S66 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLCC1Q96S66 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCC1Q96S66 RARRES2P2-201ENST00000394842 485 ntBASIC19.12■□□□□ 0.65
CLCC1Q96S66 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCC1Q96S66 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLCC1Q96S66 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCC1Q96S66 LINC01124-201ENST00000409786 2117 ntBASIC19.12■□□□□ 0.65
CLCC1Q96S66 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.11■□□□□ 0.65
CLCC1Q96S66 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCC1Q96S66 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCC1Q96S66 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCC1Q96S66 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCC1Q96S66 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCC1Q96S66 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCC1Q96S66 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCC1Q96S66 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCC1Q96S66 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCC1Q96S66 AC009831.1-201ENST00000580420 1582 ntBASIC19.1■□□□□ 0.65
CLCC1Q96S66 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCC1Q96S66 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCC1Q96S66 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCC1Q96S66 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCC1Q96S66 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCC1Q96S66 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCC1Q96S66 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCC1Q96S66 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCC1Q96S66 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CLCC1Q96S66 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCC1Q96S66 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCC1Q96S66 RAP2CP1-202ENST00000605179 643 ntBASIC19.09■□□□□ 0.65
CLCC1Q96S66 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCC1Q96S66 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCC1Q96S66 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCC1Q96S66 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CLCC1Q96S66 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CLCC1Q96S66 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLCC1Q96S66 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLCC1Q96S66 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CLCC1Q96S66 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.08■□□□□ 0.64
CLCC1Q96S66 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCC1Q96S66 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLCC1Q96S66 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.08■□□□□ 0.64
CLCC1Q96S66 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCC1Q96S66 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCC1Q96S66 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLCC1Q96S66 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLCC1Q96S66 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLCC1Q96S66 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms