Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40CQ96S21 FOXO3B-201ENST00000395675 1928 ntBASIC18.59■□□□□ 0.57
RAB40CQ96S21 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40CQ96S21 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40CQ96S21 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40CQ96S21 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40CQ96S21 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB40CQ96S21 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40CQ96S21 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40CQ96S21 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40CQ96S21 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAB40CQ96S21 ANOS2P-203ENST00000472227 1816 ntBASIC18.58■□□□□ 0.56
RAB40CQ96S21 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40CQ96S21 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40CQ96S21 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40CQ96S21 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40CQ96S21 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB40CQ96S21 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40CQ96S21 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40CQ96S21 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40CQ96S21 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB40CQ96S21 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB40CQ96S21 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB40CQ96S21 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RAB40CQ96S21 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB40CQ96S21 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40CQ96S21 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40CQ96S21 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40CQ96S21 AL157400.5-201ENST00000507624 621 ntBASIC18.56■□□□□ 0.56
RAB40CQ96S21 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB40CQ96S21 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB40CQ96S21 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB40CQ96S21 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RAB40CQ96S21 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40CQ96S21 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RAB40CQ96S21 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 DUSP8P3-201ENST00000399571 1760 ntBASIC18.55■□□□□ 0.56
RAB40CQ96S21 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 AC092068.2-201ENST00000590491 1708 ntBASIC18.55■□□□□ 0.56
RAB40CQ96S21 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 KRT18P10-201ENST00000388836 1287 ntBASIC18.55■□□□□ 0.56
RAB40CQ96S21 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.55■□□□□ 0.56
RAB40CQ96S21 EP400NL-214ENST00000641289 2402 ntBASIC18.55■□□□□ 0.56
RAB40CQ96S21 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40CQ96S21 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40CQ96S21 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RAB40CQ96S21 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40CQ96S21 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40CQ96S21 SMPD5-203ENST00000639008 1464 ntBASIC18.54■□□□□ 0.56
RAB40CQ96S21 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAB40CQ96S21 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40CQ96S21 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB40CQ96S21 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.54■□□□□ 0.56
RAB40CQ96S21 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40CQ96S21 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40CQ96S21 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAB40CQ96S21 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40CQ96S21 LINC00565-201ENST00000562710 2331 ntBASIC18.54■□□□□ 0.56
RAB40CQ96S21 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40CQ96S21 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB40CQ96S21 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40CQ96S21 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40CQ96S21 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40CQ96S21 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40CQ96S21 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40CQ96S21 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40CQ96S21 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40CQ96S21 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40CQ96S21 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40CQ96S21 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB40CQ96S21 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40CQ96S21 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40CQ96S21 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40CQ96S21 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40CQ96S21 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40CQ96S21 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RAB40CQ96S21 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40CQ96S21 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40CQ96S21 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40CQ96S21 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RAB40CQ96S21 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.52■□□□□ 0.55
RAB40CQ96S21 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RAB40CQ96S21 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40CQ96S21 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RAB40CQ96S21 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40CQ96S21 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40CQ96S21 AC127496.7-201ENST00000625110 1798 ntBASIC18.51■□□□□ 0.55
RAB40CQ96S21 MIR639-201ENST00000384974 98 ntBASIC18.51■□□□□ 0.55
RAB40CQ96S21 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40CQ96S21 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB40CQ96S21 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAB40CQ96S21 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RAB40CQ96S21 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RAB40CQ96S21 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms