Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
AP1S3Q96PC3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 AC126177.7-201ENST00000547904 679 ntBASIC17.24■□□□□ 0.35
AP1S3Q96PC3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S3Q96PC3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S3Q96PC3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.22■□□□□ 0.35
AP1S3Q96PC3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 AC141586.4-201ENST00000624558 1573 ntBASIC17.21■□□□□ 0.35
AP1S3Q96PC3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP1S3Q96PC3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.2■□□□□ 0.34
AP1S3Q96PC3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 SLC6A10P-202ENST00000431994 2058 ntBASIC17.2■□□□□ 0.34
AP1S3Q96PC3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP1S3Q96PC3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 DUX4L11-201ENST00000611504 1267 ntBASIC17.19■□□□□ 0.34
AP1S3Q96PC3 DUX4L12-201ENST00000614593 1267 ntBASIC17.19■□□□□ 0.34
AP1S3Q96PC3 DUX4L14-201ENST00000621227 1267 ntBASIC17.19■□□□□ 0.34
AP1S3Q96PC3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
AP1S3Q96PC3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 AL024507.2-201ENST00000606070 2574 ntBASIC17.18■□□□□ 0.34
AP1S3Q96PC3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
AP1S3Q96PC3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms