Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC00052Q96N35 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.87■□□□□ 0.61
LINC00052Q96N35 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00052Q96N35 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00052Q96N35 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
LINC00052Q96N35 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LINC00052Q96N35 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00052Q96N35 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00052Q96N35 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00052Q96N35 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
LINC00052Q96N35 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LINC00052Q96N35 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.85■□□□□ 0.61
LINC00052Q96N35 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC00052Q96N35 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINC00052Q96N35 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LINC00052Q96N35 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00052Q96N35 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00052Q96N35 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC00052Q96N35 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LINC00052Q96N35 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00052Q96N35 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00052Q96N35 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00052Q96N35 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC00052Q96N35 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LINC00052Q96N35 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00052Q96N35 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC00052Q96N35 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.61
LINC00052Q96N35 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00052Q96N35 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00052Q96N35 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00052Q96N35 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.83■□□□□ 0.6
LINC00052Q96N35 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.83■□□□□ 0.6
LINC00052Q96N35 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LINC00052Q96N35 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00052Q96N35 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00052Q96N35 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00052Q96N35 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LINC00052Q96N35 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LINC00052Q96N35 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00052Q96N35 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LINC00052Q96N35 LINC01971-201ENST00000617888 1048 ntBASIC18.82■□□□□ 0.6
LINC00052Q96N35 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00052Q96N35 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00052Q96N35 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC00052Q96N35 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LINC00052Q96N35 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
LINC00052Q96N35 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LINC00052Q96N35 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00052Q96N35 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00052Q96N35 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00052Q96N35 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00052Q96N35 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00052Q96N35 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.81■□□□□ 0.6
LINC00052Q96N35 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC00052Q96N35 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC00052Q96N35 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00052Q96N35 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00052Q96N35 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00052Q96N35 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00052Q96N35 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00052Q96N35 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00052Q96N35 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LINC00052Q96N35 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00052Q96N35 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00052Q96N35 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC00052Q96N35 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00052Q96N35 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00052Q96N35 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LINC00052Q96N35 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00052Q96N35 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00052Q96N35 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00052Q96N35 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00052Q96N35 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LINC00052Q96N35 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00052Q96N35 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00052Q96N35 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00052Q96N35 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00052Q96N35 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00052Q96N35 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00052Q96N35 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00052Q96N35 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00052Q96N35 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00052Q96N35 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC00052Q96N35 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC00052Q96N35 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00052Q96N35 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LINC00052Q96N35 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC00052Q96N35 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00052Q96N35 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00052Q96N35 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC00052Q96N35 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms