Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHKBP1Q8TBC3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.19■■□□□ 1.46
SHKBP1Q8TBC3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
SHKBP1Q8TBC3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SHKBP1Q8TBC3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.19■■□□□ 1.46
SHKBP1Q8TBC3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHKBP1Q8TBC3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHKBP1Q8TBC3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SHKBP1Q8TBC3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.18■■□□□ 1.46
SHKBP1Q8TBC3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SHKBP1Q8TBC3 SLC6A10P-202ENST00000431994 2058 ntBASIC24.18■■□□□ 1.46
SHKBP1Q8TBC3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SHKBP1Q8TBC3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHKBP1Q8TBC3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHKBP1Q8TBC3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SHKBP1Q8TBC3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SHKBP1Q8TBC3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
SHKBP1Q8TBC3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHKBP1Q8TBC3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.16■■□□□ 1.46
SHKBP1Q8TBC3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
SHKBP1Q8TBC3 AC106739.1-201ENST00000617035 715 ntBASIC24.16■■□□□ 1.46
SHKBP1Q8TBC3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHKBP1Q8TBC3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 PBX2P1-201ENST00000493219 1291 ntBASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 AC093323.1-202ENST00000635031 2045 ntBASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SHKBP1Q8TBC3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
SHKBP1Q8TBC3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SHKBP1Q8TBC3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.14■■□□□ 1.46
SHKBP1Q8TBC3 UNC93B3-201ENST00000308076 687 ntBASIC24.14■■□□□ 1.45
SHKBP1Q8TBC3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHKBP1Q8TBC3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SHKBP1Q8TBC3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHKBP1Q8TBC3 DUSP8P4-201ENST00000399538 1761 ntBASIC24.14■■□□□ 1.45
SHKBP1Q8TBC3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.13■■□□□ 1.45
SHKBP1Q8TBC3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHKBP1Q8TBC3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHKBP1Q8TBC3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHKBP1Q8TBC3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SHKBP1Q8TBC3 SRD5A1P1-201ENST00000442297 786 ntBASIC24.13■■□□□ 1.45
SHKBP1Q8TBC3 AC131274.2-201ENST00000580697 1507 ntBASIC24.13■■□□□ 1.45
SHKBP1Q8TBC3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHKBP1Q8TBC3 AC005703.6-201ENST00000623265 1329 ntBASIC24.12■■□□□ 1.45
SHKBP1Q8TBC3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHKBP1Q8TBC3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHKBP1Q8TBC3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHKBP1Q8TBC3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.12■■□□□ 1.45
SHKBP1Q8TBC3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.12■■□□□ 1.45
SHKBP1Q8TBC3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 AC145676.1-201ENST00000514988 2004 ntBASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
SHKBP1Q8TBC3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 AL136162.1-201ENST00000607711 1078 ntBASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
SHKBP1Q8TBC3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 MIR6089-201ENST00000616698 64 ntBASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SHKBP1Q8TBC3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SHKBP1Q8TBC3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SHKBP1Q8TBC3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SHKBP1Q8TBC3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SHKBP1Q8TBC3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SHKBP1Q8TBC3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SHKBP1Q8TBC3 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms