Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 AC131274.2-201ENST00000580697 1507 ntBASIC23.79■■□□□ 1.4
PCDH19Q8TAB3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 AF131216.4-201ENST00000638924 1588 ntBASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH19Q8TAB3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 AL161729.1-201ENST00000604104 1402 ntBASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 YBX1P4-201ENST00000392794 808 ntBASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 AC103724.3-201ENST00000564481 992 ntBASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH19Q8TAB3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 AL022069.1-201ENST00000568025 1636 ntBASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH19Q8TAB3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH19Q8TAB3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH19Q8TAB3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH19Q8TAB3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH19Q8TAB3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH19Q8TAB3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH19Q8TAB3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH19Q8TAB3 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDH19Q8TAB3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PCDH19Q8TAB3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDH19Q8TAB3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDH19Q8TAB3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH19Q8TAB3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH19Q8TAB3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
PCDH19Q8TAB3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDH19Q8TAB3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
PCDH19Q8TAB3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
PCDH19Q8TAB3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH19Q8TAB3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.7■■□□□ 1.39
PCDH19Q8TAB3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
PCDH19Q8TAB3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.7■■□□□ 1.39
PCDH19Q8TAB3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDH19Q8TAB3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDH19Q8TAB3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH19Q8TAB3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH19Q8TAB3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDH19Q8TAB3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH19Q8TAB3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH19Q8TAB3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
PCDH19Q8TAB3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH19Q8TAB3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH19Q8TAB3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH19Q8TAB3 AC009299.2-201ENST00000482477 511 ntBASIC23.68■■□□□ 1.38
PCDH19Q8TAB3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms