Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPRX1Q8N7U7 AC103724.3-201ENST00000564481 992 ntBASIC19.19■□□□□ 0.66
TPRX1Q8N7U7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPRX1Q8N7U7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPRX1Q8N7U7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 MIR4281-201ENST00000580852 62 ntBASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPRX1Q8N7U7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPRX1Q8N7U7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPRX1Q8N7U7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TPRX1Q8N7U7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.17■□□□□ 0.66
TPRX1Q8N7U7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TPRX1Q8N7U7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.17■□□□□ 0.66
TPRX1Q8N7U7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TPRX1Q8N7U7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TPRX1Q8N7U7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
TPRX1Q8N7U7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPRX1Q8N7U7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TPRX1Q8N7U7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPRX1Q8N7U7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPRX1Q8N7U7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPRX1Q8N7U7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.16■□□□□ 0.66
TPRX1Q8N7U7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPRX1Q8N7U7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
TPRX1Q8N7U7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
TPRX1Q8N7U7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.14■□□□□ 0.65
TPRX1Q8N7U7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 AL031848.2-201ENST00000607670 837 ntBASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 AF131216.4-201ENST00000638924 1588 ntBASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPRX1Q8N7U7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 AC131274.2-201ENST00000580697 1507 ntBASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 RARRES2P1-201ENST00000474487 481 ntBASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.12■□□□□ 0.65
TPRX1Q8N7U7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 AL022069.1-201ENST00000568025 1636 ntBASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TPRX1Q8N7U7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TPRX1Q8N7U7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms