Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.6■■□□□ 1.21
EFCAB3Q8N7B9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
EFCAB3Q8N7B9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
EFCAB3Q8N7B9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
EFCAB3Q8N7B9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
EFCAB3Q8N7B9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.6■■□□□ 1.21
EFCAB3Q8N7B9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
EFCAB3Q8N7B9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
EFCAB3Q8N7B9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 GUSBP5-201ENST00000418136 578 ntBASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
EFCAB3Q8N7B9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
EFCAB3Q8N7B9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
EFCAB3Q8N7B9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.58■■□□□ 1.21
EFCAB3Q8N7B9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.58■■□□□ 1.21
EFCAB3Q8N7B9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.58■■□□□ 1.21
EFCAB3Q8N7B9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
EFCAB3Q8N7B9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
EFCAB3Q8N7B9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
EFCAB3Q8N7B9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
EFCAB3Q8N7B9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
EFCAB3Q8N7B9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
EFCAB3Q8N7B9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
EFCAB3Q8N7B9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
EFCAB3Q8N7B9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
EFCAB3Q8N7B9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.57■■□□□ 1.2
EFCAB3Q8N7B9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
EFCAB3Q8N7B9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
EFCAB3Q8N7B9 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.56■■□□□ 1.2
EFCAB3Q8N7B9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
EFCAB3Q8N7B9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.56■■□□□ 1.2
EFCAB3Q8N7B9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.56■■□□□ 1.2
EFCAB3Q8N7B9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
EFCAB3Q8N7B9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
EFCAB3Q8N7B9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
EFCAB3Q8N7B9 AC141586.4-201ENST00000624558 1573 ntBASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 KRT18P10-201ENST00000388836 1287 ntBASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
EFCAB3Q8N7B9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
EFCAB3Q8N7B9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 AC103834.1-201ENST00000520383 144 ntBASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EFCAB3Q8N7B9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EFCAB3Q8N7B9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.51■■□□□ 1.19
EFCAB3Q8N7B9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 MIR4508-201ENST00000584178 70 ntBASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCAB3Q8N7B9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms