Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC116Q8IYX3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC116Q8IYX3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC116Q8IYX3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCDC116Q8IYX3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CCDC116Q8IYX3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 AL022069.1-201ENST00000568025 1636 ntBASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 AF131216.4-201ENST00000638924 1588 ntBASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC116Q8IYX3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC116Q8IYX3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC116Q8IYX3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCDC116Q8IYX3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC116Q8IYX3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC116Q8IYX3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC116Q8IYX3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC116Q8IYX3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC116Q8IYX3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 AL031848.2-201ENST00000607670 837 ntBASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC116Q8IYX3 AC131274.2-201ENST00000580697 1507 ntBASIC21.6■■□□□ 1.05
CCDC116Q8IYX3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC116Q8IYX3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC116Q8IYX3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC116Q8IYX3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC116Q8IYX3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC116Q8IYX3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC116Q8IYX3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC116Q8IYX3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC116Q8IYX3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC116Q8IYX3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCDC116Q8IYX3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC116Q8IYX3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC116Q8IYX3 AL161729.1-201ENST00000604104 1402 ntBASIC21.59■■□□□ 1.05
CCDC116Q8IYX3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC116Q8IYX3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC116Q8IYX3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC116Q8IYX3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC116Q8IYX3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC116Q8IYX3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CCDC116Q8IYX3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC116Q8IYX3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC116Q8IYX3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 RARRES2P1-201ENST00000474487 481 ntBASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC116Q8IYX3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCDC116Q8IYX3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC116Q8IYX3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC116Q8IYX3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC116Q8IYX3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC116Q8IYX3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC116Q8IYX3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC116Q8IYX3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC116Q8IYX3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC116Q8IYX3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC116Q8IYX3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC116Q8IYX3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CCDC116Q8IYX3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms