Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.87■■□□□ 1.09
ZFHX4Q86UP3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ZFHX4Q86UP3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 AC099791.1-201ENST00000416440 715 ntBASIC21.86■■□□□ 1.09
ZFHX4Q86UP3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZFHX4Q86UP3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZFHX4Q86UP3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZFHX4Q86UP3 CROCCP5-201ENST00000436658 830 ntBASIC21.85■■□□□ 1.09
ZFHX4Q86UP3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
ZFHX4Q86UP3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZFHX4Q86UP3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZFHX4Q86UP3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
ZFHX4Q86UP3 AC008687.6-201ENST00000596318 630 ntBASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 MIR4651-201ENST00000582622 73 ntBASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZFHX4Q86UP3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.83■■□□□ 1.09
ZFHX4Q86UP3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.83■■□□□ 1.09
ZFHX4Q86UP3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
ZFHX4Q86UP3 AC006015.1-201ENST00000429970 570 ntBASIC21.83■■□□□ 1.09
ZFHX4Q86UP3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZFHX4Q86UP3 KRT18P6-201ENST00000555540 1265 ntBASIC21.83■■□□□ 1.08
ZFHX4Q86UP3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.83■■□□□ 1.08
ZFHX4Q86UP3 AP004609.3-201ENST00000610705 1884 ntBASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 SERBP1P1-201ENST00000396021 1160 ntBASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
ZFHX4Q86UP3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.81■■□□□ 1.08
ZFHX4Q86UP3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ZFHX4Q86UP3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.8■■□□□ 1.08
ZFHX4Q86UP3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.8■■□□□ 1.08
ZFHX4Q86UP3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZFHX4Q86UP3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZFHX4Q86UP3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.8■■□□□ 1.08
ZFHX4Q86UP3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.79■■□□□ 1.08
ZFHX4Q86UP3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 DUX4L19-201ENST00000557448 1267 ntBASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 AC080038.1-201ENST00000611274 1154 ntBASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 AC008764.7-201ENST00000593779 1081 ntBASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFHX4Q86UP3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
ZFHX4Q86UP3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZFHX4Q86UP3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
ZFHX4Q86UP3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.77■■□□□ 1.08
ZFHX4Q86UP3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZFHX4Q86UP3 AC004448.1-201ENST00000458332 883 ntBASIC21.77■■□□□ 1.08
ZFHX4Q86UP3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms