Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.39■■□□□ 1.66
RSPH3Q86UC2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.39■■□□□ 1.66
RSPH3Q86UC2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.39■■□□□ 1.66
RSPH3Q86UC2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RSPH3Q86UC2 AC092171.4-201ENST00000609130 632 ntBASIC25.39■■□□□ 1.66
RSPH3Q86UC2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RSPH3Q86UC2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.39■■□□□ 1.65
RSPH3Q86UC2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.38■■□□□ 1.65
RSPH3Q86UC2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH3Q86UC2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.38■■□□□ 1.65
RSPH3Q86UC2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH3Q86UC2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.38■■□□□ 1.65
RSPH3Q86UC2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH3Q86UC2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH3Q86UC2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
RSPH3Q86UC2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH3Q86UC2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
RSPH3Q86UC2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.37■■□□□ 1.65
RSPH3Q86UC2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH3Q86UC2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH3Q86UC2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.37■■□□□ 1.65
RSPH3Q86UC2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH3Q86UC2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH3Q86UC2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH3Q86UC2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RSPH3Q86UC2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RSPH3Q86UC2 EDA-201ENST00000338901 1233 ntBASIC25.36■■□□□ 1.65
RSPH3Q86UC2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.36■■□□□ 1.65
RSPH3Q86UC2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.36■■□□□ 1.65
RSPH3Q86UC2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.36■■□□□ 1.65
RSPH3Q86UC2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RSPH3Q86UC2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.36■■□□□ 1.65
RSPH3Q86UC2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RSPH3Q86UC2 AC145676.1-201ENST00000514988 2004 ntBASIC25.36■■□□□ 1.65
RSPH3Q86UC2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.35■■□□□ 1.65
RSPH3Q86UC2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RSPH3Q86UC2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RSPH3Q86UC2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RSPH3Q86UC2 AC024257.2-201ENST00000549699 147 ntBASIC25.35■■□□□ 1.65
RSPH3Q86UC2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
RSPH3Q86UC2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.34■■□□□ 1.65
RSPH3Q86UC2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.34■■□□□ 1.65
RSPH3Q86UC2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RSPH3Q86UC2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
RSPH3Q86UC2 AL355001.2-201ENST00000620617 1191 ntBASIC25.34■■□□□ 1.65
RSPH3Q86UC2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.34■■□□□ 1.65
RSPH3Q86UC2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RSPH3Q86UC2 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.33■■□□□ 1.65
RSPH3Q86UC2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
RSPH3Q86UC2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 AC091060.1-201ENST00000623524 1766 ntBASIC25.32■■□□□ 1.64
RSPH3Q86UC2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH3Q86UC2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 SYT6-210ENST00000641643 1587 ntBASIC25.31■■□□□ 1.64
RSPH3Q86UC2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 SUDS3P1-201ENST00000505831 966 ntBASIC25.31■■□□□ 1.64
RSPH3Q86UC2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.31■■□□□ 1.64
RSPH3Q86UC2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RSPH3Q86UC2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RSPH3Q86UC2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RSPH3Q86UC2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RSPH3Q86UC2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.3■■□□□ 1.64
RSPH3Q86UC2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.3■■□□□ 1.64
RSPH3Q86UC2 AL031432.3-201ENST00000607698 485 ntBASIC25.3■■□□□ 1.64
RSPH3Q86UC2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
RSPH3Q86UC2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RSPH3Q86UC2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RSPH3Q86UC2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RSPH3Q86UC2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RSPH3Q86UC2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.29■■□□□ 1.64
RSPH3Q86UC2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RSPH3Q86UC2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.28■■□□□ 1.64
RSPH3Q86UC2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
RSPH3Q86UC2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RSPH3Q86UC2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RSPH3Q86UC2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RSPH3Q86UC2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RSPH3Q86UC2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RSPH3Q86UC2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
RSPH3Q86UC2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RSPH3Q86UC2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms