Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 DUX4L28-201ENST00000623687 678 ntBASIC12.29□□□□□ -0.44
LCA10Q71F78 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LCA10Q71F78 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LCA10Q71F78 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LCA10Q71F78 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LCA10Q71F78 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LCA10Q71F78 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LCA10Q71F78 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LCA10Q71F78 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC12.28□□□□□ -0.44
LCA10Q71F78 AP004609.3-201ENST00000610705 1884 ntBASIC12.28□□□□□ -0.44
LCA10Q71F78 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LCA10Q71F78 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LCA10Q71F78 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LCA10Q71F78 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC12.28□□□□□ -0.44
LCA10Q71F78 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.28□□□□□ -0.44
LCA10Q71F78 AC007952.6-201ENST00000573168 2673 ntBASIC12.28□□□□□ -0.44
LCA10Q71F78 AC003957.1-201ENST00000625108 2673 ntBASIC12.28□□□□□ -0.44
LCA10Q71F78 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LCA10Q71F78 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC12.28□□□□□ -0.44
LCA10Q71F78 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LCA10Q71F78 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LCA10Q71F78 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LCA10Q71F78 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LCA10Q71F78 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LCA10Q71F78 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LCA10Q71F78 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.27□□□□□ -0.45
LCA10Q71F78 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
LCA10Q71F78 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LCA10Q71F78 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LCA10Q71F78 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC12.27□□□□□ -0.45
LCA10Q71F78 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LCA10Q71F78 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LCA10Q71F78 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LCA10Q71F78 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC12.26□□□□□ -0.45
LCA10Q71F78 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LCA10Q71F78 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LCA10Q71F78 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC12.26□□□□□ -0.45
LCA10Q71F78 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
LCA10Q71F78 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC12.26□□□□□ -0.45
LCA10Q71F78 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC12.26□□□□□ -0.45
LCA10Q71F78 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC12.26□□□□□ -0.45
LCA10Q71F78 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC12.26□□□□□ -0.45
LCA10Q71F78 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LCA10Q71F78 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.26□□□□□ -0.45
LCA10Q71F78 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LCA10Q71F78 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC12.26□□□□□ -0.45
LCA10Q71F78 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC12.26□□□□□ -0.45
LCA10Q71F78 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC12.26□□□□□ -0.45
LCA10Q71F78 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC12.26□□□□□ -0.45
LCA10Q71F78 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LCA10Q71F78 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LCA10Q71F78 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LCA10Q71F78 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.25□□□□□ -0.45
LCA10Q71F78 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LCA10Q71F78 GALC-202ENST00000393568 2054 ntTSL 2 BASIC12.25□□□□□ -0.45
LCA10Q71F78 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC12.25□□□□□ -0.45
LCA10Q71F78 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LCA10Q71F78 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC12.25□□□□□ -0.45
LCA10Q71F78 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LCA10Q71F78 MIR3665-201ENST00000578708 105 ntBASIC12.25□□□□□ -0.45
LCA10Q71F78 CALM3-209ENST00000597743 577 ntTSL 4 BASIC12.25□□□□□ -0.45
LCA10Q71F78 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.25□□□□□ -0.45
LCA10Q71F78 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LCA10Q71F78 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC12.25□□□□□ -0.45
LCA10Q71F78 AC138932.3-201ENST00000567634 1902 ntBASIC12.25□□□□□ -0.45
LCA10Q71F78 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LCA10Q71F78 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LCA10Q71F78 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LCA10Q71F78 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LCA10Q71F78 CIB2-204ENST00000557846 934 ntTSL 3 BASIC12.24□□□□□ -0.45
LCA10Q71F78 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC12.24□□□□□ -0.45
LCA10Q71F78 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LCA10Q71F78 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LCA10Q71F78 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LCA10Q71F78 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.24□□□□□ -0.45
LCA10Q71F78 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LCA10Q71F78 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LCA10Q71F78 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LCA10Q71F78 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LCA10Q71F78 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LCA10Q71F78 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LCA10Q71F78 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms