Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINC00575Q6W349 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00575Q6W349 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00575Q6W349 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00575Q6W349 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00575Q6W349 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00575Q6W349 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00575Q6W349 AL024507.2-201ENST00000606070 2574 ntBASIC14.55□□□□□ -0.08
LINC00575Q6W349 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00575Q6W349 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00575Q6W349 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 CHML-204ENST00000638121 920 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 LSR-203ENST00000360798 1963 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC00575Q6W349 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC00575Q6W349 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00575Q6W349 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00575Q6W349 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00575Q6W349 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 AC021231.2-201ENST00000594613 730 ntBASIC14.53□□□□□ -0.08
LINC00575Q6W349 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00575Q6W349 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00575Q6W349 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.53□□□□□ -0.08
LINC00575Q6W349 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC00575Q6W349 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00575Q6W349 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00575Q6W349 AC092068.2-201ENST00000590491 1708 ntBASIC14.52□□□□□ -0.08
LINC00575Q6W349 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00575Q6W349 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00575Q6W349 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC00575Q6W349 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00575Q6W349 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00575Q6W349 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
LINC00575Q6W349 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC14.52□□□□□ -0.09
LINC00575Q6W349 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00575Q6W349 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00575Q6W349 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00575Q6W349 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00575Q6W349 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00575Q6W349 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00575Q6W349 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00575Q6W349 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 AC087741.3-201ENST00000624270 1347 ntBASIC14.51□□□□□ -0.09
LINC00575Q6W349 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00575Q6W349 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00575Q6W349 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00575Q6W349 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LINC00575Q6W349 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00575Q6W349 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.5□□□□□ -0.09
LINC00575Q6W349 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00575Q6W349 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00575Q6W349 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00575Q6W349 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00575Q6W349 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms