Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R3AQ6IN85 SNX5-217ENST00000606557 1087 ntBASIC26.15■■□□□ 1.78
PPP4R3AQ6IN85 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R3AQ6IN85 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
PPP4R3AQ6IN85 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PPP4R3AQ6IN85 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
PPP4R3AQ6IN85 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.13■■□□□ 1.77
PPP4R3AQ6IN85 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PPP4R3AQ6IN85 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PPP4R3AQ6IN85 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PPP4R3AQ6IN85 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PPP4R3AQ6IN85 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.12■■□□□ 1.77
PPP4R3AQ6IN85 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PPP4R3AQ6IN85 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.12■■□□□ 1.77
PPP4R3AQ6IN85 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PPP4R3AQ6IN85 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
PPP4R3AQ6IN85 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.11■■□□□ 1.77
PPP4R3AQ6IN85 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PPP4R3AQ6IN85 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PPP4R3AQ6IN85 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PPP4R3AQ6IN85 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.11■■□□□ 1.77
PPP4R3AQ6IN85 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.11■■□□□ 1.77
PPP4R3AQ6IN85 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PPP4R3AQ6IN85 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
PPP4R3AQ6IN85 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PPP4R3AQ6IN85 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PPP4R3AQ6IN85 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.1■■□□□ 1.77
PPP4R3AQ6IN85 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PPP4R3AQ6IN85 GUSBP5-201ENST00000418136 578 ntBASIC26.1■■□□□ 1.77
PPP4R3AQ6IN85 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PPP4R3AQ6IN85 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PPP4R3AQ6IN85 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
PPP4R3AQ6IN85 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.08■■□□□ 1.76
PPP4R3AQ6IN85 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC26.07■■□□□ 1.76
PPP4R3AQ6IN85 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.06■■□□□ 1.76
PPP4R3AQ6IN85 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.05■■□□□ 1.76
PPP4R3AQ6IN85 MIR6722-201ENST00000617286 78 ntBASIC26.05■■□□□ 1.76
PPP4R3AQ6IN85 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R3AQ6IN85 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 UNC93B8-201ENST00000511903 705 ntBASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms