Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 LONRF2P2-201ENST00000439212 571 ntBASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 AC139795.1-202ENST00000500444 432 ntBASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATPAF1Q5TC12 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 C9orf163-202ENST00000624034 2573 ntBASIC19.81■□□□□ 0.76
ATPAF1Q5TC12 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATPAF1Q5TC12 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATPAF1Q5TC12 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ATPAF1Q5TC12 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATPAF1Q5TC12 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.8■□□□□ 0.76
ATPAF1Q5TC12 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.8■□□□□ 0.76
ATPAF1Q5TC12 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.8■□□□□ 0.76
ATPAF1Q5TC12 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.8■□□□□ 0.76
ATPAF1Q5TC12 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.79■□□□□ 0.76
ATPAF1Q5TC12 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF1Q5TC12 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF1Q5TC12 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF1Q5TC12 BHLHE23-202ENST00000612929 1109 ntBASIC19.78■□□□□ 0.76
ATPAF1Q5TC12 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.78■□□□□ 0.76
ATPAF1Q5TC12 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
ATPAF1Q5TC12 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATPAF1Q5TC12 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 ABCB10P4-201ENST00000566803 2184 ntBASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATPAF1Q5TC12 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
ATPAF1Q5TC12 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATPAF1Q5TC12 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATPAF1Q5TC12 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ATPAF1Q5TC12 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATPAF1Q5TC12 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATPAF1Q5TC12 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATPAF1Q5TC12 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms