Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 RPS2P7-201ENST00000447334 885 ntBASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RUNDC3AQ59EK9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.71■■□□□ 1.07
RUNDC3AQ59EK9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RUNDC3AQ59EK9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.71■■□□□ 1.07
RUNDC3AQ59EK9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.71■■□□□ 1.07
RUNDC3AQ59EK9 MIR4449-201ENST00000578365 66 ntBASIC21.71■■□□□ 1.07
RUNDC3AQ59EK9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RUNDC3AQ59EK9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.71■■□□□ 1.07
RUNDC3AQ59EK9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RUNDC3AQ59EK9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.7■■□□□ 1.06
RUNDC3AQ59EK9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RUNDC3AQ59EK9 ANOS2P-203ENST00000472227 1816 ntBASIC21.7■■□□□ 1.06
RUNDC3AQ59EK9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RUNDC3AQ59EK9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RUNDC3AQ59EK9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.69■■□□□ 1.06
RUNDC3AQ59EK9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RUNDC3AQ59EK9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 AL161729.1-201ENST00000604104 1402 ntBASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RUNDC3AQ59EK9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.66■■□□□ 1.06
RUNDC3AQ59EK9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RUNDC3AQ59EK9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RUNDC3AQ59EK9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RUNDC3AQ59EK9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.66■■□□□ 1.06
RUNDC3AQ59EK9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.66■■□□□ 1.06
RUNDC3AQ59EK9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RUNDC3AQ59EK9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RUNDC3AQ59EK9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RUNDC3AQ59EK9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RUNDC3AQ59EK9 AC092068.2-201ENST00000590491 1708 ntBASIC21.64■■□□□ 1.06
RUNDC3AQ59EK9 AL592295.1-201ENST00000400984 884 ntBASIC21.64■■□□□ 1.05
RUNDC3AQ59EK9 SPCS2P3-201ENST00000500401 656 ntBASIC21.64■■□□□ 1.05
RUNDC3AQ59EK9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.64■■□□□ 1.05
RUNDC3AQ59EK9 AC018755.3-202ENST00000596210 929 ntBASIC21.64■■□□□ 1.05
RUNDC3AQ59EK9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RUNDC3AQ59EK9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RUNDC3AQ59EK9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 DUSP8P3-201ENST00000399571 1760 ntBASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RUNDC3AQ59EK9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms