Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 KRT16P3-201ENST00000439127 1283 ntBASIC19.95■□□□□ 0.78
CHRFAM7AQ494W8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRFAM7AQ494W8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 MIR638-201ENST00000385237 100 ntBASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 LONRF2P2-201ENST00000439212 571 ntBASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 LINC00543-201ENST00000567234 1845 ntBASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRFAM7AQ494W8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRFAM7AQ494W8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CHRFAM7AQ494W8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHRFAM7AQ494W8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRFAM7AQ494W8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRFAM7AQ494W8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRFAM7AQ494W8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRFAM7AQ494W8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRFAM7AQ494W8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRFAM7AQ494W8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 AC141586.4-201ENST00000624558 1573 ntBASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 AC133561.1-201ENST00000568600 2415 ntBASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRFAM7AQ494W8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRFAM7AQ494W8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 RPS2P7-201ENST00000447334 885 ntBASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 AL139246.5-201ENST00000606645 996 ntBASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.89■□□□□ 0.77
CHRFAM7AQ494W8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHRFAM7AQ494W8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 AC012676.1-201ENST00000574705 1949 ntBASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 UNC93B8-201ENST00000511903 705 ntBASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRFAM7AQ494W8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRFAM7AQ494W8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRFAM7AQ494W8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRFAM7AQ494W8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms