Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RSPO4Q2I0M5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RSPO4Q2I0M5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RSPO4Q2I0M5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
RSPO4Q2I0M5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RSPO4Q2I0M5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.57■■□□□ 1.2
RSPO4Q2I0M5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.57■■□□□ 1.2
RSPO4Q2I0M5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
RSPO4Q2I0M5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
RSPO4Q2I0M5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RSPO4Q2I0M5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 AC027612.3-201ENST00000413684 1047 ntBASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 AC080038.1-201ENST00000611274 1154 ntBASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RSPO4Q2I0M5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 AC090877.2-201ENST00000558441 1738 ntBASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 AC126544.1-201ENST00000580842 1059 ntBASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 FOXO3B-201ENST00000395675 1928 ntBASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RSPO4Q2I0M5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RSPO4Q2I0M5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RSPO4Q2I0M5 CCDC92B-201ENST00000575506 885 ntBASIC22.54■■□□□ 1.2
RSPO4Q2I0M5 AL358852.1-201ENST00000623174 1268 ntBASIC22.54■■□□□ 1.2
RSPO4Q2I0M5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RSPO4Q2I0M5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RSPO4Q2I0M5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RSPO4Q2I0M5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RSPO4Q2I0M5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.53■■□□□ 1.2
RSPO4Q2I0M5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.52■■□□□ 1.2
RSPO4Q2I0M5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.52■■□□□ 1.2
RSPO4Q2I0M5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.52■■□□□ 1.2
RSPO4Q2I0M5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
RSPO4Q2I0M5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.52■■□□□ 1.2
RSPO4Q2I0M5 TSPY26P-201ENST00000476365 1326 ntBASIC22.52■■□□□ 1.2
RSPO4Q2I0M5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 AC104771.1-201ENST00000603335 964 ntBASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RSPO4Q2I0M5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 MIR6084-201ENST00000622012 110 ntBASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RSPO4Q2I0M5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RSPO4Q2I0M5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RSPO4Q2I0M5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.49■■□□□ 1.19
RSPO4Q2I0M5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RSPO4Q2I0M5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RSPO4Q2I0M5 AL355802.2-201ENST00000402069 882 ntBASIC22.48■■□□□ 1.19
RSPO4Q2I0M5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RSPO4Q2I0M5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RSPO4Q2I0M5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RSPO4Q2I0M5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RSPO4Q2I0M5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RSPO4Q2I0M5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RSPO4Q2I0M5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RSPO4Q2I0M5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RSPO4Q2I0M5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RSPO4Q2I0M5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms