Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.23■■□□□ 1.31
CDH17Q12864 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH17Q12864 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CDH17Q12864 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDH17Q12864 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH17Q12864 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH17Q12864 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH17Q12864 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH17Q12864 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.23■■□□□ 1.31
CDH17Q12864 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH17Q12864 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH17Q12864 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.22■■□□□ 1.31
CDH17Q12864 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDH17Q12864 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.22■■□□□ 1.31
CDH17Q12864 MIR4508-201ENST00000584178 70 ntBASIC23.22■■□□□ 1.31
CDH17Q12864 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CDH17Q12864 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
CDH17Q12864 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDH17Q12864 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDH17Q12864 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDH17Q12864 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CDH17Q12864 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.21■■□□□ 1.31
CDH17Q12864 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.21■■□□□ 1.31
CDH17Q12864 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDH17Q12864 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
CDH17Q12864 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH17Q12864 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDH17Q12864 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH17Q12864 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CDH17Q12864 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.2■■□□□ 1.3
CDH17Q12864 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH17Q12864 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH17Q12864 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH17Q12864 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH17Q12864 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.19■■□□□ 1.3
CDH17Q12864 AC131274.2-201ENST00000580697 1507 ntBASIC23.19■■□□□ 1.3
CDH17Q12864 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH17Q12864 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH17Q12864 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH17Q12864 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
CDH17Q12864 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.19■■□□□ 1.3
CDH17Q12864 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.19■■□□□ 1.3
CDH17Q12864 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.19■■□□□ 1.3
CDH17Q12864 MIR4281-201ENST00000580852 62 ntBASIC23.19■■□□□ 1.3
CDH17Q12864 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH17Q12864 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDH17Q12864 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
CDH17Q12864 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.18■■□□□ 1.3
CDH17Q12864 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.18■■□□□ 1.3
CDH17Q12864 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH17Q12864 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.18■■□□□ 1.3
CDH17Q12864 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.18■■□□□ 1.3
CDH17Q12864 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.18■■□□□ 1.3
CDH17Q12864 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.18■■□□□ 1.3
CDH17Q12864 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH17Q12864 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.18■■□□□ 1.3
CDH17Q12864 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDH17Q12864 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH17Q12864 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CDH17Q12864 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CDH17Q12864 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH17Q12864 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH17Q12864 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH17Q12864 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH17Q12864 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.17■■□□□ 1.3
CDH17Q12864 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH17Q12864 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH17Q12864 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH17Q12864 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CDH17Q12864 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CDH17Q12864 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.16■■□□□ 1.3
CDH17Q12864 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.16■■□□□ 1.3
CDH17Q12864 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH17Q12864 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.16■■□□□ 1.3
CDH17Q12864 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.15■■□□□ 1.3
CDH17Q12864 AF131216.4-201ENST00000638924 1588 ntBASIC23.15■■□□□ 1.3
CDH17Q12864 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDH17Q12864 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDH17Q12864 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDH17Q12864 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDH17Q12864 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CDH17Q12864 AC103834.1-201ENST00000520383 144 ntBASIC23.14■■□□□ 1.29
CDH17Q12864 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.14■■□□□ 1.29
CDH17Q12864 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDH17Q12864 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDH17Q12864 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDH17Q12864 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDH17Q12864 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.13■■□□□ 1.29
CDH17Q12864 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDH17Q12864 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.13■■□□□ 1.29
CDH17Q12864 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDH17Q12864 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms